XLOC_033986


Basic Information

Item Value
gene id XLOC_033986
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 42612825 ~ 42617882 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00068589
CccagatatcgaattgaactgaattcgtggcatgataatcgtaaccgaaccgtgagaccagtgtaggttcacacccctattcaatagatagatttttacaaaacttgacaatGAAAATaaggctatgtatgagaaagtcttacgtctctgatttataaaaaaatgttatattgttaaatacttatttattaaatatttgtttattatttattgtatgtagtttcaaatgaaattattactccaatcattattgcttttattactattaccattgataataataaaaatcataatcataataacaataataataataataataattcatattagagtgatttctctGCAGGTTCatatgactctgaagactggagtaatgaagctgaaaattcatctttaaaatcactggaataaattctttaattaaattataaactacttttgaacagttattttatagtgcaataacatttcacaattttacaatttgtactgtatttttgttaaaataattttggtggagccagtgaaaattttggcaaggtaagtaaaaatctgaaccactggccggAACATAAAATGTAGTTTAAATTTGCGGCTCACTTCACTTTGAAAattgttgcacatttattaaCCTTTTACCGAGCacacattgagaaaaaaaaaaaaaacattggaaaaaccctacatattatgTATACATACACAGCTGAagaaagaattattagcccccctgaattataaaccgcttgtttattttttcctcaatttctgtttaacgaagagaaaattgtttcaacacatttctaaacataatagttttaagaactaatttctaacaactgatttattttatctttgccatgatgacagtaaataatgttttactagatatttttcaagacttctttacagcttaaagtgacatttaaaggcttaactaggttaattaggttaactaggcaggttagggtaattaggcaagctattgtataacagtggtttgttttgtagattatcgagaaaaaatatagcttaaaggggctgataattttgtc

Function

GO:

id name namespace
GO:0046034 ATP metabolic process biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00068589 True 1058 lncRNA 0.28 2 42612825 42617882

Neighbor

gene id symbol gene type direction distance location
XLOC_033984 adamts18 coding upstream 64833 42460302 ~ 42547992 (+)
XLOC_033983 NA coding upstream 219331 42367439 ~ 42393494 (+)
XLOC_033981 phkb coding upstream 266780 42206543 ~ 42346045 (+)
XLOC_033982 CU570782.3 coding upstream 298937 42313774 ~ 42313888 (+)
XLOC_033980 gpt2 coding upstream 711137 41887429 ~ 41901688 (+)
XLOC_033987 BX470088.1 coding downstream 102523 42720405 ~ 42720519 (+)
XLOC_033988 BX284620.1 coding downstream 160118 42778000 ~ 42778114 (+)
XLOC_033989 BX284696.1 coding downstream 317244 42935126 ~ 42939263 (+)
XLOC_033990 NA coding downstream 609853 43227735 ~ 43238372 (+)
XLOC_033991 NA coding downstream 788754 43406636 ~ 43407736 (+)
XLOC_033978 AL928906.1 non-coding upstream 851446 41761261 ~ 41761379 (+)
XLOC_033976 BX005319.2 non-coding upstream 1030166 41582544 ~ 41582659 (+)
XLOC_033975 BX005319.1 non-coding upstream 1152390 41459653 ~ 41460435 (+)
XLOC_033992 BX005396.4 non-coding downstream 848753 43466635 ~ 43468412 (+)

Expression


Co-expression Network