XLOC_033981 (phkb)


Basic Information

Item Value
gene id XLOC_033981
gene name phkb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 42206543 ~ 42346045 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00066531
GCTTCCTGATGATGAAAATGTCAGTCTGTTTATCAGAGTTAAAGTCACCGAAAGCCGCTACTGTACCATTGTTTTCCTGGCCAAATAAATCGCTAGTAACGTCCTGCAATGCAAACGTGACGTGTTGTCCGACAAAACTTGATAATAACGtcaaaaaacaagcaaatgaCAGCAACATTTTGCTGTTAGCTTCGACCAACAAAACTGGAACACGGCACGTCGTTCTTCGGCAGGAGTGAATAGGCTTTGCGACAAGTGCGAGTGTTCAACGGCAGTGTGAGTGTTGTtattttgctgtcatcatggcaagctTAGCGGATGTCGGCTGGAAGCTGCTGGAGTTCAAAGCCAGATCTAAGCGATCAGGCTCCATCTATGAACCCCTTAAGCTGTCCATACTGCACCGGGAGGATGAGCCCCTTTGGGAGAAACTTGACCGCTTCTATAGTGCAGtcaaGAGCACCATATTGAATTACCAGAGCCCTACCACTGGCCTGTTCCCGGTGAAGACCTGCTCCACCTGTAAGGAGGCTAAAGTCAGAGACTCGCTCTACTGCGCTGCCAGCATCTGGGCACTGGCATTGGCATACAGGCGCATCGATGATGACATGGGCCGCACTCATGAACTGGAACACTCTGCTATCAAATGTATGCGAGGGATTATGTACTGCTACATGCGGCAGTCTGATAAGGTGGAGAATTTTAAGCAAGACCCGAGTCCATCCACGTGCCTGCATTCAATTTTTAACGTGGACACTGGAGATGAGGTTTACCCGTATAAGGAGTACAACCATCTACAGATCGATGCATTGTCTCTGTTTCTCTTGTACCTGGTTGAAATGATTTGCTCTGGCCTTCAAATAATCTACAACACAGATGAGGTATCATTTATTCAGAATCTAGTCTTCTGTGTGGAGAGGGCGTACCGTGTGCCAGACTTTGGCATGTGGGAACGAGGAAGCAAATATAACAATGGAAGCACAGAACTCCATTCAAGCTCGGTGGGACTCGCCAAAGCAGCTCTGGAAGCCATCAATGGATTCAATCTGTTTGGAAATCAGGGATGCTCCTGGTCAGTCATTTTCGTGGATCTGGATGCTCATAACAGAAACAGACAGACTCTGTGCTCTCTCCTGCCAAGGGAGTCTCGTTCCCATAACACAGATTCAGCCCTCCTGCCCTGCATCAGTTACCCAGCGTTCGCTGTGGACGATGATGCTCTGTATTCCCAGACTTTGGACAAGATAGTCCGCAAGCTGAAGGGCAAGTATGGCTTTAAGCGATTCTTAAGAGACGGCTTCAGAACAGCCAATGAGGACAAGAACCGCAGGCACTATAAACCTGCTGAGATGAAGCTCTTTGACGGTATTGAGTGCGAGTTTCCAATTTTTTACATCTATATGATGATTGATGGTGTGTTCAGAGGAAACCCCGATCAAGTCAAAGAGTACCAGGAGCTGCTACAAGCTGTCATTTTCCAGTCCTTTGAGGGCCACGCAGTTATTCCTAAGTATTATCATGTGCCGGCGGACTTTGTGGAAGCTGAACAGAAGAAACACGGCAGCCAGAAGCGCTTCCCCAGCAACTCAGGCCGTGATGGGATGCTGTTCCTCTGGGGACAGGCCCTCTATAACATCGCTAAGCTGCTGGTGGATGGTTTGATCAGCCCAAAGGACATCGACCCCATCCATCGCTATGTGCCACGACAGGATCAGAGGAACGTCAGCATGCGATACTCCAATCAGGGTCCCATTGAGAACGATGTGGTCATTCACGTGGCCCTGATAGCAGAAAGTCAAAGATTGCAGGTCTTCCTCAACACCTATGGCATCCAAACGCAGACCCCGCAGCAGGTGGAGCCCATTCAGATCTGGCCTCAGAAAGAACTGGTGAAGGCATACCGCTTCCTTGCCGTCAATAAGAAACTTGGCTTAAGCGGGAGACCGGAGAGGCCCGTTGGCTGCATTGGCACTTGCAAGATTTATCGAATCCTTGGAAAGACTGTGGTGTGCTATCCAATTGTCTTCGATCTCAGCGACTTCTACTTGTCGCAGGATGTCATGCTTTTGATAGATGACATTAAGAATGCCTTGCAGTTTATTAAGCAGTGCTGGAAGATGCCTGGACGGCCTCTTTTTCTCGTACTTATCAGAGAGGACAACATTAAGGGGAGCCGATTTAACCCCATCCTGGACATGCTGGCATCTTTCAAGAAGGGAAACATTGGAGGAGTCAAAGTGCATGTGGATAGACTTCAGACCCTGATATCAGGCGCTGTGGTGGAGCAATTGGATTTTCTACGCGTCAATGAAGCTGAGATCCCTGAATTTAAGAGCTTTGAGGAGCTGGAGTTGCCCAAGCACTCGAAGGTGAAGCGTCAAACAAGCACACCCAATGCCTCTGATCTGGAGCAGCAGCCTGAGATCAATGACGAGGAATGGTTCAATAAATCCACATTTGAAATTCTGCAGAAATTCAACGATTGTGACTGTCTGGCCAGTCAAGCCCAGCTGGCCAGCATTCTCCTCAAAAAAGAAGGCCCTGAATTCTTCAATACAAATGAGAATCTTAAGGATGAATTGGAGAGAATCTACAGAAGAGCTGGCAGCAGGAAGCTTTGGTCCGTTGTGCGCCTTGCTGCCAGTCTCTTAACTAAACTAGTGGACAGCCTTGCTCCGAGCATTACTAGCGTTTTAGTGCATGGCAAGCAGGTGACCCTTGGCCTGTTCGGGCATGAGGAGATCGTGATTTCGAACCCTCTGTCTCCAGGAGTCATTAAAGACATCATCTACAGCAAGTGCAGCCCTCACGGCGAGAGAGAGGCCGTACTGCAGCAGGAGCTGGTCATCCACATCGGCTGGATCATCTCCAACAACCCAGAGCTGTTCAGTGGCATGCTGAAGATTCGTGTCGGGTGGATTGTTCAAGCCATGAAGCACGAGCTGAAGATTCGCGCTGGAGACATGCCACCACAGGACATTTACCAGATGTCCCCTAGTGATGTCAAACAGCTCCTGCTGGACGTCCTCCAGTCTCAGCAGAGTGGCAGATCATGGCTTAACAGACGTCAGATCGATGGCTCCCTCAATCGAACCCCTCTCGGCTTCTATGACCGCGTTTGGCAAATCCTAGAGCGAACACGTAACGGCATCATGGTTGGCGGAAAACATCTCCCTCAGCAACCCACTCTGTCAGATATGACCATGTATGAGATGAATTTCTCTCTGTTAGTGGAAGACACACTGAAAAACATTGTTTTGCCTGAATATAGGCAGATTATTGTTGAGCTCTTGATGGTGGTGTCAATTGTACTGGAAAGAAACCCGGAGCTGGAGTTTCAGGAACCAGTGGATTTGGACAAATTGGTAAAGGAGGCTTTTGCTGACTTTCAGAAAGATCGCAGCAAACTGGAGGGCACTGAGAAACGGGATACCATGGAGGCCTTCTACAACACACCAGCCCTGGGGAAACAAAGCACGTCCAGCTACCTGACCAAAGCAGTAATGATCCAGCTGCTGCAGGGAGAGGTGAAGCCCAGTAAAGATGACCCGTGTTCTGTCAGCTAAAGCACCTCACGCTGCTGTCAGCATTACTTAGACTGCCGTACAAGCACAGTCTTACTTACATAGGATTGCTTTTGTCTGGAATAGATGATATAgcatataaataaaaatctatatttgttCAGGTCCCTGACCAATGTTATGACCACGTTTGCATCTACTTTTTAAAACCCAGTTTTTGTGGCAGGATTGTTCCTGCTGCGTTATCAATGCCAGAACACAACTTGAAAATGTCTCACTGTAAGCTATTGTTTAGAGGTCAGAAGACACTAATGTCAAATAGTAAGGTATTGAACTACAGTATATGCATGTCATTATTTCAGAATGTGGGTTGACGTCTTAGATGTTGTTGGTTTGTGCACTTATAAGTCAAGATGGTAACTGTTTTGCCAacgttttaaagggatagttcaccctaaaataaaaatgtaatcaccttcaagtggttccaaacatttccgagtatctttcttctgttaagtctgcaaaacctgtaaccattgacttccattgtaggaaaaacaaatactattgaagtcaatggttagctttcatcaaaatatattgttttgtgttcaccatGAGAAAGAAACTCGTAAATGTTTGAAATAAGCAAACGGTCAGTAAATGAGGAcatcatttaaatatttgtgcACTGTCACTATAATTTAGAAATTATATatgcaaatgtattttaacagttgTGTTTACTTCAGAGAGCCTTTGGCTGCTAGTATATATTGTGCATTATTTGCCTTCATGTGTACTGTTGTATGTTAGATttctaatatataaaaacatttgagTGTTTTGGTTTCTTCCTTGTACGAACAGAATTTTCAGTCcgtcattattaaataaatatatatatatata
>TCONS_00066532
ggcaagctTAGCGGATGTCGGCTGGAAGCTGCTGGAGTTCAAAGCCAGATCTAAGCGATCAGTTTAACTAATAGACGACTGGCGTAGAATTCATCTAATGAAAAATGGCTGACACTGCCAATGAGCCTCTGAGCGAACGTCGCAAACTCCGGAAGCTTGGCTCCATCTATGAACCCCTTAAGCTGTCCATACTGCACCGGGAGGATGAGCCCCTTTGGGAGAAACTTGACCGCTTCTATAGTGCAGtcaaGAGCACCATATTGAATTACCAGAGCCCTACCACTGGCCTGTTCCCGGTGAAGACCTGCTCCACCTGTAAGGAGGCTAAAGTCAGAGACTCGCTCTACTGCGCTGCCAGCATCTGGGCACTGGCATTGGCATACAGGCGCATCGATGATGACATGGGCCGCACTCATGAACTGGAACACTCTGCTATCAAATGTATGCGAGGGATTATGTACTGCTACATGCGGCAGTCTGATAAGGTGGAGAATTTTAAGCAAGACCCGAGTCCATCCACGTGCCTGCATTCAATTTTTAACGTGGACACTGGAGATGAGGTTTACCCGTATAAGGAGTACAACCATCTACAGATCGATGCATTGTCTCTGTTTCTCTTGTACCTGGTTGAAATGATTTGCTCTGGCCTTCAAATAATCTACAACACAGATGAGGTATCATTTATTCAGAATCTAGTCTTCTGTGTGGAGAGGGCGTACCGTGTGCCAGACTTTGGCATGTGGGAACGAGGAAGCAAATATAACAATGGAAGCACAGAACTCCATTCAAGCTCGGTGGGACTCGCCAAAGCAGCTCTGGAAGCCATCAATGGATTCAATCTGTTTGGAAATCAGGGATGCTCCTGGTCAGTCATTTTCGTGGATCTGGATGCTCATAACAGAAACAGACAGACTCTG
>TCONS_00066533
ATGGCTGACACTGCCAATGAGCCTCTGAGCGAACGTCGCAAACTCCGGAAGCTTGGCTCCATCTATGAACCCCTTAAGCTGTCCATACTGCACCGGGAGGATGAGCCCCTTTGGGAGAAACTTGACCGCTTCTATAGTGCAGtcaaGAGCACCATATTGAATTACCAGAGCCCTACCACTGGCCTGTTCCCGGTGAAGACCTGCTCCACCTGTAAGGAGGCTAAAGTCAGAGACTCGCTCTACTGCGCTGCCAGCATCTGGGCACTGGCATTGGCATACAGGCGCATCGATGATGACATGGGCCGCACTCATGAACTGGAACACTCTGCTATCAAATGTATGCGAGGGATTATGTACTGCTACATGCGGCAGTCTGATAAGGTGGAGAATTTTAAGCAAGACCCGAGTCCATCCACGTGCCTGCATTCAATTTTTAACGTGGACACTGGAGATGAGGTTTACCCGTATAAGGAGTACAACCATCTACAGATCGATGCATTGTCTCTGTTTCTCTTGTACCTGGTTGAAATGATTTGCTCTGGCCTTCAAATAATCTACAACACAGATGAGGTATCATTTATTCAGAATCTAGTCTTCTGTGTGGAGAGGGCGTACCGTGTGCCAGACTTTGGCATGTGGGAACGAGGAAGCAAATATAACAATGGAAGCACAGAACTCCATTCAAGCTCGGTGGGACTCGCCAAAGCAGCTCTGGAAGCCATCAATGGATTCAATCTGTTTGGAAATCAGGGATGCTCCTGGTCAGTCATTTTCGTGGATCTGGATGCTCATAACAGAAACAGACAGACTCTGTGCTCTCTCCTGCCAAGGGAGTCTCGTTCCCATAACACAGATTCAGCCCTCCTGCCCTGCATCAGTTACCCAGCGTTCGCTGTGGACGATGATGCTCTGTATTCCCAGACTTTGGACAAGATAGTCCGCAAGCTGAAGGGCAAGTATGGCTTTAAGCGATTCTTAAGAGACGGCTTCAGAACAGCCAATGAGGACAAGAACCGCAGGCACTATAAACCTGCTGAGATGAAGCTCTTTGACGGTATTGAGTGCGAGTTTCCAATTTTTTACATCTATATGATGATTGATGGTGTGTTCAGAGGAAACCCCGATCAAGTCAAAGAGTACCAGGAGCTGCTACAAGCTGTCATTTTCCAGTCCTTTGAGGGCCACGCAGTTATTCCTAAGTATTATCATGTGCCGGCGGACTTTGTGGAAGCTGAACAGAAGAAACACGGCAGCCAGAAGCGCTTCCCCAGCAACTCAGGCCGTGATGGGATGCTGTTCCTCTGGGGACAGGCCCTCTATAACATCGCTAAGCTGCTGGTGGATGGTTTGATCAGCCCAAAGGACATCGACCCCATCCATCGCTATGTGCCACGACAGGATCAGAGGAACGTCAGCATGCGATACTCCAATCAGGGTCCCATTGAGAACGATGTGGTCATTCACGTGGCCCTGATAGCAGAAAGTCAAAGATTGCAGGTCTTCCTCAACACCTATGGCATCCAAACGCAGACCCCGCAGCAGGTGGAGCCCATTCAGATCTGGCCTCAGAAAGAACTGGTGAAGGCATACCGCTTCCTTGCCGTCAATAAGAAACTTGGCTTAAGCGGGAGACCGGAGAGGCCCGTTGGCTGCATTGGCACTTGCAAGATTTATCGAATCCTTGGAAAGACTGTGGTGTGCTATCCAATTGTCTTCGATCTCAGCGACTTCTACTTGTCGCAGGATGTCATGCTTTTGATAGATGACATTAAGAATGCCTTGCAGTTTATTAAGCAGTGCTGGAAGATGCCTGGACGGCCTCTTTTTCTCGTACTTATCAGAGAGGACAACATTAAGGGGAGCCGATTTAACCCCATCCTGGACATGCTGGCATCTTTCAAGAAGGGAAACATTGGAGGAGTCAAAGTGCATGTGGATAGACTTCAGACCCTGATATCAGGCGCTGTGGTGGAGCAATTGGATTTTCTACGCGTCAATGAAGCTGAGATCCCTGAATTTAAGAGCTTTGAGGAGCTGGAGTTGCCCAAGCACTCGAAGGTGAAGCGTCAAACAAGCACACCCAATGCCTCTGATCTGGAGCAGCAGCCTGAGATCAATGACGAGGAATGGTTCAATAAATCCACATTTGAAATTCTGCAGAAATTCAACGATTGTGACTGTCTGGCCAGTCAAGCCCAGCTGGCCAGCATTCTCCTCAAAAAAGAAGGCCCTGAATTCTTCAATACAAATGAGAATCTTAAGGATGAATTGGAGAGAATCTACAGAAGAGCTGGCAGCAGGAAGCTTTGGTCCGTTGTGCGCCTTGCTGCCAGTCTCTTAACTAAACTAGTGGACAGCCTTGCTCCGAGCATTACTAGCGTTTTAGTGCATGGCAAGCAGGTGACCCTTGGCCTGTTCGGGCATGAGGAGATCGTGATTTCGAACCCTCTGTCTCCAGGAGTCATTAAAGACATCATCTACAGCAAGTGCAGCCCTCACGGCGAGAGAGAGGCCGTACTGCAGCAGGAGCTGGTCATCCACATCGGCTGGATCATCTCCAACAACCCAGAGCTGTTCAGTGGCATGCTGAAGATTCGTGTCGGGTGGATTGTTCAAGCCATGAAGCACGAGCTGAAGATTCGCGCTGGAGACATGCCACCACAGGACATTTACCAGATGTCCCCTAGTGATGTCAAACAGCTCCTGCTGGACGTCCTCCAGTCTCAGCAGAGTGGCAGATCATGGCTTAACAGACGTCAGATCGATGGCTCCCTCAATCGAACCCCTCTCGGCTTCTATGACCGCGTTTGGCAAATCCTAGAGCGAACACGTAACGGCATCATGGTTGGCGGAAAACATCTCCCTCAGCAACCCACTCTGTCAGATATGACCATGTATGAGATGAATTTCTCTCTGTTAGTGGAAGACACACTGAAAAACATTGTTTTGCCTGAATATAGGCAGATTATTGTTGAGCTCTTGATGGTGGTGTCAATTGTACTGGAAAGAAACCCGGAGCTGGAGTTTCAGGAACCAGTGGATTTGGACAAATTGGTAAAGGAGGCTTTTGCTGACTTTCAGAAAGATCGCAGCAAACTGGAGGGCACTGAGAAACGGGATACCATGGAGGCCTTCTACAACACACCAGCCCTGGGGAAACAAAGCACGTCCAGCTACCTGACCAAAGCAGTAATGATCCAGCTGCTGCAGGGAGAGGTGAAGCCCAGTAAAGATGACCCGTGTTCTGTCAGCTAA
>TCONS_00066535
AGCTTTGAGGAGCTGGAGTTGCCCAAGCACTCGAAGGTGAAGCGTCAAACAAGCACACCCAATGCCTCTGATCTGGAGCAGCAGCCTGAGATCAATGACGAGGAATGGTTCAATAAATCCACATTTGAAATTCTGCAGAAATTCAACGATTGTGACTGTCTGGCCAGTCAAGCCCAGCTGGCCAGCATTCTCCTCAAAAAAGAAGGCCCTGAATTCTTCAATACAAATGAGAATCTTAAGGATGAATTGGAGAGAATCTACAGAAGAGCTGGCAGCAGGAAGCTTTGGCTGGCGGTGCGTAGTGCTGCGGCCGTTATCCAGAAGTTTGCTGGTTCTATAGCTCCTCATATTACTACTATGTTGGTCCATGGCAAGCAGGTGACCCTTGGCCTGTTCGGGCATGAGGAGATCGTGATTTCGAACCCTCTGTCTCCAGGAGTCATTAAAGACATCATCTACAGCAAGTGCAGCCCTCACGGCGAGAGAGAGGCCGTACTGCAGCAGGAGCTGGTCATCCACATCGGCTGGATCATCTCCAACAACCCAGAGCTGTTCAGTGGCATGCTGAAGATTCGTGTCGGGTGGATTGTTCAAGCCATGAAGCACGAGCTGAAGATTCGCGCTGGAGACATGCCACCACAGGACATTTACCAGATGTCCCCTAGTGATGTCAAACAGCTCCTGCTGGACGTCCTCCAGTCTCAGCAGAGTGGCAGATCATGGCTTAACAGACGTCAGATCGATGGCTCCCTCAATCGAACCCCTCTCGGCTTCTATGACCGCGTTTGGCAAATCCTAGAGCGAACACGTAACGGCATCATGGTTGGCGGAAAACATCTCCCTCAGGTAACTACTCTATATGATT

Function

symbol description
phkb Predicted to enable calmodulin binding activity. Predicted to act upstream of or within glycogen metabolic process. Predicted to be located in plasma membrane. Predicted to be part of phosphorylase kinase complex. Human ortholog(s) of this gene implicated in glycogen storage disease IXb. Orthologous to human PHKB (phosphorylase kinase regulatory subunit beta).

GO:

id name namespace
GO:0005975 carbohydrate metabolic process biological_process
GO:0005977 glycogen metabolic process biological_process
GO:0005886 plasma membrane cellular_component
GO:0005964 phosphorylase kinase complex cellular_component
GO:0016020 membrane cellular_component
GO:0005516 calmodulin binding molecular_function
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-110411-149 Predicted to enable calmodulin binding activity. Predicted to act upstream of or within glycogen metabolic process. Predicted to be located in plasma membrane. Predicted to be part of phosphorylase kinase complex. Human ortholog(s) of this gene implicated in glycogen storage disease IXb. Orthologous to human PHKB (phosphorylase kinase regulatory subunit beta).

Ensembl:

ensembl_id ENSDARG00000078284

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00066531 False 4439 mRNA 0.46 31 42206543 42346045
TCONS_00066532 False 917 mRNA 0.48 10 42206847 42264849
TCONS_00066533 False 3255 mRNA 0.49 31 42208859 42345172
TCONS_00066535 True 865 mRNA 0.51 7 42328578 42341691

Neighbor

gene id symbol gene type direction distance location
XLOC_033980 gpt2 coding upstream 304855 41887429 ~ 41901688 (+)
XLOC_033979 orc6 coding upstream 380225 41812190 ~ 41826318 (+)
XLOC_033978 AL928906.1 coding upstream 445164 41761261 ~ 41761379 (+)
XLOC_033977 hrh3 coding upstream 453306 41748693 ~ 41753237 (+)
XLOC_033976 BX005319.2 coding upstream 623884 41582544 ~ 41582659 (+)
XLOC_033983 NA coding downstream 21394 42367439 ~ 42393494 (+)
XLOC_033984 adamts18 coding downstream 114257 42460302 ~ 42547992 (+)
XLOC_033985 NA coding downstream 206141 42552186 ~ 42849712 (+)
XLOC_033986 NA coding downstream 266780 42612825 ~ 42617882 (+)
XLOC_033987 BX470088.1 coding downstream 374360 42720405 ~ 42720519 (+)
XLOC_033975 BX005319.1 non-coding upstream 746108 41459653 ~ 41460435 (+)
XLOC_033966 AL772146.1 non-coding upstream 1093248 41112901 ~ 41113295 (+)
XLOC_033965 NA non-coding upstream 1102206 40962728 ~ 41104337 (+)
XLOC_033988 BX284620.1 non-coding downstream 431955 42778000 ~ 42778114 (+)

Expression


Co-expression Network