XLOC_034623 (si:ch211-119e14.1)


Basic Information

Item Value
gene id XLOC_034623
gene name si:ch211-119e14.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 18606798 ~ 18617187 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00067413
AGTTGAGTTACGCGCATGCTCTCTGACTGAATTCACGTATTTCCTCATAAACATCAACAAACCGCTCGATGTATGACACATTCAAATCTTCTATTTTGTGCTCTGGTTGGCTATGAGTTTATGGACAGTTGAATGAAGTCATGGCGTCAGGAACGGTTGACAGCACTCCAACTGTCCTTGCCCTCCTCTTCATATGGGTCATCCTTGTTCTGGCTCTGGTTTACTTTTACAGAAAACTAAACACAGAAACGAACGGCCAATACACTGTCCAGCGGATGGTGTTTGCCCCCGGCGGCCTGCGGGACCAGCTGAGACAAGGAGTCGGCGTCGTGGAAAACAGATTTGACGTCCATATTTGGCCTCAACCCCGTGAAGATGAAGAGAACATCAGAGACAAAGATGAAGATGACGAAAATGATCAAGACAAACAAAACGACACCTGCACGGAGGAGCGAGAGCAGGAAAACCAGGAGGATAAAGATGAGGATTCCTCAAGCGATTATTCCAGCGTTGACCTGAGGGAAAGAGCAAAGATGCAGAAGGCTGGAAACAAGAATGAAGAGAAAGAAGACGAGGAGGAGAAAccgaaggaggaggaggagaaaaaagAAGAGGAGGTGGAGGATGATAAAGCAGAAGACGTGAAGAAAGAGGAGAAAGTGGGATTGCTTGTTGATCTCAAGCCATTCACAGGCAGCGCCATTTGGTCTGAGGAGAGTAAAGAGAAAAAAGAGGGAAATGACTTTACGGCTTTATGAAGCACAGAGACGTTGCTTGAATTTAAAAAAGGTGGGAAATCAAGGGACTTTATCAAATGGGTTACACAATGCTcttgttgttttttgtattttttttatttgagctaGTTTAACCCTGTAAAGCCTGATGTGGAAAAATCGTGCAAAAAAAATGGCacacactttacaacaaggtttaATGTGTTTCTACCTTAGAAAGCAAAAAAGATGCTTAGCATTTAGCAATAAaaggtcattttaattttaacaacttTTGACTAATAGAGTAATGGAGTTTAtagtaactgatttcttttatctttgtcttgatgacagtaaataatatttgactagatatttttcaagacacttctatacagcaaatgcgacatttaaaggcttaactaagttaattaggttaactgggcaggttggggtaattaggcaagttattgtataatggtgatttgttctgtagaatatcgaaaaaaatgtatagcttaaaggggctaataattttgacattaaaatggcttttaaaaaattaaaaactgcttttattgtagtctaaataaaactaataagactttctccagaagaaaaaatattatcagacatactgtgaaaatttccttgctcttttaaaaataatttgggaaatatataaaaaaatcaaaggggggctaatgattttttattatttaatttaaatatatatatatttttttcttttttttttctcaaagttaACAAAAATTCCAATAATACAGAATAAcaccataaaataaaacaatcacacatagtatgtaaaaataaataaataaacacaataataatagtaaataaaaaaggatgagATACAGTATAAACCAATCAAAAAGCTATTTTATCCAATCATGTGGTGCTATTTGTGTATAATCCAAAAAATAGATACCCTGATAACCCCTTCCTCTAAAAAAATATGTGGTCTTTTCCAAGAGTACTAAGTTGCAAACTTCTGAGAACAACAGCCCAATTGCTACCTCCATGTAGATTGTATAACAATTATCAGTATCAGCTTCAAGGTGCTGTGAAGTactttgaaatgtgtatttatcTTCGATGTTTGATCTTAACTGAAACATGAAGCCAGGGTGgtacatagagtagctcctccccttttaatacAGTCAATGGGGTTTTGTTTTTATGACAGCTCTGCCGATGAGAGTTGTTGaactcaagcgcatcaaatgaaaagcaaatgagtaGCGTCttaaagggggtggggcatgtcagatacaagagagcatttgattggtcaagatttgatgagaaactgaagtatgaggggattcatttaggcggaagtgacaaactgcaagcgttggatgtttatatcaggtttatatcctTAAATGTGAATTTTATTACTGtattggagcacactagcttatatcCTAATGACTAACATTAAGTTATATGACTTTAATAGCACAATTTTACTGGAAATTTGAATTTGTATTATTTCCAAATAAACATACTTCTGGATCCAATCAATTATTTGGATACATGTTATAATCTTgcgcactgaataaaataaaataattaaatgatatttttaaagGTCTGTTTTTAATTATCAGATTTGATGTACAGGCTGTTTTGTAAGACATTAATATGGAGCCCATAACTGAGGTAAAACGTTGGTTTTATCTACAAATAAAGATTACGTTCTGATCGTTATTACAGCGTAGCATAAAATGTAATATCAGTTGTCAGTTTATATCTCCTAATAATGCTTAGTCTGATCATTTTTAACATGGAATACAATAGAATGatacataaatacaataaaatgcaacataaacagtacaatataataataaaaatgttcccCTAAAGCCTAATGTATCATATTTGATTGTTACATTCAGTTTTTTTCTAATGAAGAATGAATAATCAAGACAAACTAAGTTGCTTCAGTCAAGTAAACTTTGCTAACAataaaaaagtcacattatttcACAGTTAAAAGACCCACAAATGATACTAAAAAGTATTTTACTTGCTGGGTTTCTTATTAAGTTTTTATTAAGATCATGTTTTTCATAGCAGGTTTATTGTAGAATATGTGCAGGCTTTACAGGGTTAATTTTCTGTAAAGTGGCTCCACACCGCTGCTGTTGTTAGTTTGATCCACTTCCTGTTGTTTTTCTGCAAATGCTGACTGTGTGAACAAAGTACATTTGAAACTTTTGTAACCTTTTTAGaagatgtaaatatatatttttttgcaataaaaatgttttttgtgtgtgtcag

Function

symbol description
si:ch211-119e14.1 Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-141216-162 Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000099518

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00067413 True 3041 mRNA 0.34 3 18606798 18617187

Neighbor

gene id symbol gene type direction distance location
XLOC_034622 dtx4a coding downstream 5592 18557939 ~ 18601206 (-)
XLOC_034621 msantd1 coding downstream 52195 18549669 ~ 18554603 (-)
XLOC_034620 rgs12a coding downstream 59378 18474563 ~ 18547420 (-)
XLOC_034619 znf16l coding downstream 135835 18462242 ~ 18470963 (-)
XLOC_034618 sstr1b coding downstream 161047 18412621 ~ 18445751 (-)
XLOC_034624 coro1b coding upstream 795 18617982 ~ 18656069 (-)
XLOC_034625 nectin4a coding upstream 39821 18657008 ~ 18700364 (-)
XLOC_034626 trmt10a coding upstream 85347 18702534 ~ 18712554 (-)
XLOC_034627 NA coding upstream 99573 18716760 ~ 18730474 (-)
XLOC_034628 NA coding upstream 145760 18762947 ~ 18773947 (-)
XLOC_034617 CT027807.1 non-coding downstream 359107 18247037 ~ 18247691 (-)
XLOC_034615 CU457795.1 non-coding downstream 744258 17862425 ~ 17862540 (-)
XLOC_034610 CT030012.1 non-coding downstream 961048 17641188 ~ 17645750 (-)
XLOC_034601 CU179702.2 non-coding downstream 1226488 17358084 ~ 17380310 (-)
XLOC_034597 CU179757.1 non-coding downstream 1342489 17261616 ~ 17264309 (-)
XLOC_034630 NA non-coding upstream 298355 18915542 ~ 18919985 (-)
XLOC_034631 NA non-coding upstream 373731 18990918 ~ 19003533 (-)
XLOC_034632 NA non-coding upstream 390568 19007755 ~ 19015887 (-)

Expression


Co-expression Network