XLOC_034969


Basic Information

Item Value
gene id XLOC_034969
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 40557036 ~ 40561701 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00069276
atccgctttgaaatgttttaaagaaagttggaaagtggaaacctgtaaccattgacttcaatagtgttTGTTATTCTGACCATGGAAGTTGATACAAGTTTTCAGTTTTGGTCAAAATATCTTTAATAgggttcaacaaaataaagaaacttaaaggtttacAACTGTTTGATGGCATGTAATTTTTGTGtaaattaaccctttaaatatgGCAGAATTTTGACTGTGTGGTCAGTGATTTATGGACATGCAGGTATAGCCATGGGAAAAGTCAACAGTTATTATTGTACAGCTATTACTGTAATGGAACATGATCATCATTTTTTCTGTAGGGTTTTCTCCGTTCGGCC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00069276 True 350 lncRNA 0.34 2 40557036 40561701

Neighbor

gene id symbol gene type direction distance location
XLOC_034967 wdr60 coding downstream 411939 40122918 ~ 40145097 (-)
XLOC_034966 si:ch73-174h16.5 coding downstream 434897 40102391 ~ 40122139 (-)
XLOC_034965 shrprbck1r coding downstream 474983 40058757 ~ 40082053 (-)
XLOC_034964 grpel1 coding downstream 805496 39744244 ~ 39751540 (-)
XLOC_034963 ccdc96 coding downstream 818576 39730429 ~ 39738460 (-)
XLOC_034970 ube3c coding upstream 22238 40583939 ~ 40630698 (-)
XLOC_034971 nom1 coding upstream 83068 40644769 ~ 40657831 (-)
XLOC_034972 rnf32 coding upstream 154055 40715756 ~ 40738774 (-)
XLOC_034973 CU041319.3 coding upstream 305114 40866815 ~ 40884705 (-)
XLOC_034974 rbm33a coding upstream 338511 40900212 ~ 40959867 (-)
XLOC_034962 BX908792.1 non-coding downstream 840963 39715712 ~ 39716073 (-)
XLOC_034958 BX842701.1 non-coding downstream 1115986 39437384 ~ 39441050 (-)
XLOC_034955 CABZ01033553.1 non-coding downstream 1321924 39234995 ~ 39235112 (-)
XLOC_034953 CR356225.1 non-coding downstream 1420262 39136650 ~ 39136774 (-)
XLOC_034952 CR382325.1 non-coding downstream 1576358 38978002 ~ 38980678 (-)
XLOC_034975 CU041319.2 non-coding upstream 387174 40948875 ~ 40949190 (-)
XLOC_034985 BX005319.3 non-coding upstream 931316 41493017 ~ 41493131 (-)
XLOC_034988 NA non-coding upstream 1145839 41707540 ~ 41709193 (-)
XLOC_034995 NA non-coding upstream 1416687 41978388 ~ 41980012 (-)

Expression


Co-expression Network