XLOC_034973 (CU041319.3)


Basic Information

Item Value
gene id XLOC_034973
gene name CU041319.3
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 40866815 ~ 40884705 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00068020
AGGACTAATTCACAATCCTTGCACGAATTCAACTGTACTTTCCGACTTTCAGATTTCGAAAGGCGAAAGAATTACCTGTGTCATGAGCCTGTCCGCTCCCGTGTTCTCCTCATCCTTAAAGATAATGTCGGGATTATAATTTGGAGTAAGTTCTTTAAATCTCTCCGAATTGCGCGTTATCTTGCCCTCGTATCTGCCGCTGGCCCCTAAGGTCTTCTCCGCGACATTAGGTATGAACTGCTTGTAGGCGAGAGGTGTCAGCTTCTTCGGATGTCTTCTTCTGCCGTAGCCTCTGCCAGGACCGCAGGCCAGTCCGGACACCACCAAGGACAGAGTGAGAAGAGACACCAGCAGCACTCTCGTCAAAAGCCGCATTTTGCCGCACGCTGAATCTCGCTGCGGTGTTCTCGAGCGGTCTGTCTAGCAGGGTTTCTCGTTGTCGAGGCGCGGATCTCCGGCGATGTCCTTGCCGTCTCCTCGGTTCACGCGTGTCCCTCAGCAGCGCCAAGCCCCGACCGTGACAGGTGCGGAAACGTGCGACTGATAACGCATCGGAGGTTTGCGGCGGGGATGCGAAAGGTGCTTTTCCATGGTGTACCAGAGCGAGAGAGCAGGAGACAGAGATTAAGCTGGCTCTTCTGCCCAACAGCTTATTTGAGATATTGGAAAAGGCTCTTCCTGTGCACACAAATGCTAAGCTGTCTGTTTGGGAGAAAGATCAGCCTGCAAAAACCCTGTCACCCCTTAAAGTCCACTTCAGTGACAGATTAAGCCATGGTAACCACTGTGTTCCCTGGCCCATAGCAGCGGGTAAGGCTGAAGTTGAGGACGCTTTCATAGACGTAGGCGACCTTGCAGATCCAGGAATAAAATAATATCGAGCATTCTGGAATTAAACGTACATGTTTCAAGCTTTCACACAAATGG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105553

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00068020 True 927 lncRNA 0.51 3 40866815 40884705

Neighbor

gene id symbol gene type direction distance location
XLOC_034972 rnf32 coding downstream 128041 40715756 ~ 40738774 (-)
XLOC_034971 nom1 coding downstream 208984 40644769 ~ 40657831 (-)
XLOC_034970 ube3c coding downstream 236117 40583939 ~ 40630698 (-)
XLOC_034968 dnajb6b coding downstream 288082 40536928 ~ 40578733 (-)
XLOC_034969 NA coding downstream 305114 40557036 ~ 40561701 (-)
XLOC_034974 rbm33a coding upstream 15507 40900212 ~ 40959867 (-)
XLOC_034975 CU041319.2 coding upstream 64170 40948875 ~ 40949190 (-)
XLOC_034976 en2a coding upstream 104196 40988901 ~ 40993456 (-)
XLOC_034977 insig1 coding upstream 123068 41007773 ~ 41014773 (-)
XLOC_034978 htr5ab coding upstream 195944 41080649 ~ 41102498 (-)
XLOC_034962 BX908792.1 non-coding downstream 1150742 39715712 ~ 39716073 (-)
XLOC_034958 BX842701.1 non-coding downstream 1425765 39437384 ~ 39441050 (-)
XLOC_034955 CABZ01033553.1 non-coding downstream 1631703 39234995 ~ 39235112 (-)
XLOC_034953 CR356225.1 non-coding downstream 1730041 39136650 ~ 39136774 (-)
XLOC_034985 BX005319.3 non-coding upstream 608312 41493017 ~ 41493131 (-)
XLOC_034988 NA non-coding upstream 822835 41707540 ~ 41709193 (-)
XLOC_034995 NA non-coding upstream 1093683 41978388 ~ 41980012 (-)
XLOC_034997 CR759753.1 non-coding upstream 1268705 42153410 ~ 42153524 (-)

Expression


Co-expression Network