XLOC_035018 (nae1)


Basic Information

Item Value
gene id XLOC_035018
gene name nae1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 44773912 ~ 44794322 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00068098
GTCGATCGGAAAATAGTGAAACAGTGGCGCGCCGGTAGGATTCAGCcgtcacagagagagagacagaggacCATGACAGACCCCAAAACAAGCAAAGAGCAGAAGTATGATCGACAGCTCAGGTTGTGGGGAGATCATGGACAGGAAGCACTTGAAAATGCCCATGTGTGTCTCATCAATGCCACTGCATCTGGCACTGAAATCCTCAAGAACCTTGTGCTGCCCGGAATCGGAGCCTTTACCATTGTAGACGGGCACAAAGTTTCAGGGGAGGATGTTGGAAACAACTTTTTTCTCAGCAGCAGTGCTATTGGAAAGAACAGGGCACAGGCGGCTACGGAATTGCTCCAGGAGCTCAACAGTGATGTTTCTGGAAACTTTGTGGAAGAGAGTCCTGATAAGCTATTGGACAACGACTGTGAGTTTTTTCACAGGTTTAGTCTGGTAATTGCCGTCCAGCTTCCAGAAAGcaCATGTTTGAGGCTCGGTGCAGTGTTATGGGAGGCTGGAGTGCCATTTCTTGTATGTCGAACATATGGACTTATTGGCTACATGAGGCTGATTGTAAAGGAGCACACAGTGGTGGAGTCTCATCCAGATAATGTTTTGGAGGATCTGAGACTAGACCAGCCATTCACAGAGCTCAAACGCCATGTAGAGTCTTACGACTTGGACAACATGGAGAAGAAGGATCACAGTCACACACCGTGGATCATTGTGGTTGCCAGATATTTGGAAAAGTGGTACAATGAGAACAACTCCCAGTTGCCCAAGAATTATAAGGAGAAAGAAGCATTCAGGCAACTCCTCAGAGAAGGGATCCTTAAGAATGAGAATGGAGGACTTGAAGATGAAGAGAACTTTGAGGAGGCGATCAAGAACGTGAACACTGCTCTAAACCCCACTAAGATCTCCAGTGGAACGCAGGACATTTTTAATGCtgagcagtgtgaaaacattacCTCACAGAGCTCGTCCTTTTGGGTGATGGCACATGGAGTTCGGGACTTTGTTCAAAATGAGGGGAACGGAAACCTCCCGGTTCGAGGAAGCATCCCAGACATGATTGCAGATTCAGACAAATTCATCAAGTTACAAAATGTGTACAGAGACAAAGCCATGAGGGATGCAGCAGTTGTGTCCAAACATGTTGAAATGCTTCTACAATCAGTTGGAAAGACTCCAGAAAGCATCTCTGAACAGGAAATCAAACTCTTTTGTAAGAACGCGGCTTTCCTCCGAGTGGTGCGCTGCAGGTCTCTGGCTGACGAGTACAGTGTGGACACTTTTAATAAAGATGAAATCACATCCTGTATGGACAGTCCAGACAGTGAGATGGTTCTGTACCTTATGCTCCGCTCAGTCGACCGCTTCTATCAGCAACACTCCCGCTACCCAGgtGTCTACAATTATCAGGTGGAGGAAGACATTAACAAGCTGAAGCTGTGTGTAAACAGTCTCCTGCAGGAGTACAGTCTTAACGTCAATGTAAAAGATGACTACATCCATGAGTTCTGCCGATATGGAGCTGCTGAGCCACACACAGTCGCAGCTTTTCTGGGAGGATCAGCGGCTCAAGAGGCCATTAAAATCATCACGCACCAGTTTGTACCTTTCAACAACACGTTCCTCTATAACGCCATGTCACAGACCTCTGCGACTTTTCAGCTGTAAAACAGTCATCTCCATCTGTTTCTCCATTCCTCTGTCGAAGTGCTGGCCTCAAATTGGCACTCAAGTTTATTTATGCTTGCATTGGtcgatggtgttgctttttagaCAAGTCTCAACACTGATGCTAAATACTGAATAAACAGTGTATCTCCAaa

Function

symbol description
nae1 Predicted to enable NEDD8 activating enzyme activity. Predicted to be involved in protein neddylation. Predicted to be active in cytoplasm. Orthologous to human NAE1 (NEDD8 activating enzyme E1 subunit 1).

GO:

id name namespace
GO:0045116 protein neddylation biological_process
GO:0032446 protein modification by small protein conjugation biological_process
GO:0005737 cytoplasm cellular_component
GO:0019781 NEDD8 activating enzyme activity molecular_function
GO:0008641 ubiquitin-like modifier activating enzyme activity molecular_function

KEGG:

id description
ko05010 Alzheimer disease
ko04121 Ubiquitin system

ZFIN:

id description
ZDB-GENE-040426-1552 Predicted to enable NEDD8 activating enzyme activity. Predicted to be involved in protein neddylation. Predicted to be active in cytoplasm. Orthologous to human NAE1 (NEDD8 activating enzyme E1 subunit 1).

Ensembl:

ensembl_id ENSDARG00000011301

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00068098 True 1829 mRNA 0.46 20 44773912 44794322

Neighbor

gene id symbol gene type direction distance location
XLOC_035017 NA coding downstream 38839 44730329 ~ 44735073 (-)
XLOC_035016 dync1li2 coding downstream 69002 44674956 ~ 44704910 (-)
XLOC_035014 cmtm4 coding downstream 101817 44628681 ~ 44672095 (-)
XLOC_035015 BX511128.4 coding downstream 105795 44668003 ~ 44668117 (-)
XLOC_035013 NA coding downstream 159991 44611449 ~ 44613921 (-)
XLOC_035019 cdh16 coding upstream 62949 44857271 ~ 44957503 (-)
XLOC_035020 BX511136.2 coding upstream 111977 44906299 ~ 44906413 (-)
XLOC_035021 rrad coding upstream 165866 44960188 ~ 44963154 (-)
XLOC_035022 ciao2b coding upstream 171451 44965773 ~ 44970994 (-)
XLOC_035023 VSTM2B coding upstream 246204 45040526 ~ 45076131 (-)
XLOC_035011 BX842687.1 non-coding downstream 765184 44002012 ~ 44008728 (-)
XLOC_035009 BX005396.2 non-coding downstream 1058473 43603957 ~ 43715439 (-)
XLOC_035024 NA non-coding upstream 620242 45414564 ~ 45415894 (-)
XLOC_035025 NA non-coding upstream 856777 45651099 ~ 45814324 (-)
XLOC_035026 BX511025.2 non-coding upstream 946170 45740492 ~ 45740608 (-)
XLOC_035028 NA non-coding upstream 1059329 45853651 ~ 45855961 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000026_14780225_14789500 NAE1 coding CI01000026 null 14780088 ~ 14790709 (-)