G1643658


Basic Information

Item Value
gene id G1643658
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 58875819 ~ 58876093 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1880275
gtcactaggtgtaggcaaaaccataagcaaataggtaaactgtgatataactaaggagttaatcagggtgatttttccacaaatagacaggtattttcctttccatggtagcaagatcttatccagttttgctaactttctataaacatttattggagtgagatcatttctttcttttgggatttgtataccgagtatgtcgaCATCTCCGTTagaccatttaattggtaaactacatggtaatgtaaaatgtgcattttttagtgatccaatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1880275 True 275 lncRNA 0.34 1 58875819 58876093

Neighbor

gene id symbol gene type direction distance location
disp2 disp2 coding upstream 6846 58855731 ~ 58868973 (+)
degs2 degs2 coding upstream 227067 58639045 ~ 58648752 (+)
mis18bp1 mis18bp1 coding upstream 249893 58606103 ~ 58625926 (+)
LOC110498192 LOC106610665 coding upstream 309113 58382544 ~ 58566706 (+)
dnaaf2 klhdc1 coding upstream 567645 58300100 ~ 58308174 (+)
LOC110498202 LOC106608562 coding downstream 7713 58883806 ~ 58892741 (+)
prlh2r LOC106608506 coding downstream 19159 58895252 ~ 58904165 (+)
LOC110498208 LOC106608166 coding downstream 139370 59015463 ~ 59022319 (+)
LOC110498210 osr1 coding downstream 343943 59220036 ~ 59227518 (+)
rdh14a LOC106607934 coding downstream 606849 59482942 ~ 59488394 (+)
G1643645 NA non-coding upstream 41808 58833796 ~ 58834011 (+)
G1643594 NA non-coding upstream 133937 58741508 ~ 58741882 (+)
G1643591 NA non-coding upstream 135969 58736494 ~ 58739850 (+)
G1643586 LOC106608927 non-coding upstream 153159 58718651 ~ 58722660 (+)
G1643532 NA non-coding upstream 258495 58617119 ~ 58617324 (+)
G1643659 NA non-coding downstream 101 58876194 ~ 58876397 (+)
G1643662 NA non-coding downstream 2476 58878569 ~ 58878788 (+)
G1643669 NA non-coding downstream 25264 58901357 ~ 58901652 (+)
G1643672 NA non-coding downstream 29185 58905278 ~ 58905483 (+)
G1644009 NA non-coding downstream 49667 58925760 ~ 58926052 (+)
LOC110498189 klhdc1 other upstream 577584 58293310 ~ 58298259 (+)
G1642993 LOC106611338 other upstream 699334 58164477 ~ 58176485 (+)
G1642565 NA other upstream 1193266 57656349 ~ 57682553 (+)
G1642062 NA other upstream 1599042 57275053 ~ 57276777 (+)
G1641935 NA other upstream 1731894 57135826 ~ 57143925 (+)
G1644123 NA other downstream 178430 59054523 ~ 59057223 (+)
G1644280 NA other downstream 320591 59196684 ~ 59197013 (+)
G1644569 NA other downstream 732507 59608600 ~ 59609394 (+)
G1644651 NA other downstream 871891 59747984 ~ 59748345 (+)
LOC110498402 LOC106604468 other downstream 1507428 60382983 ~ 60392450 (+)

Expression


Co-expression Network