G1644267


Basic Information

Item Value
gene id G1644267
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 59185023 ~ 59185256 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1880950
TCATAATATTATAGACCTTCATTGACATGTAGCCTACTTAGTGATGCTTTATTTAAAGTATTTGTTTCATATTAAGCAAGTTTGGAGAGGTGAACCTCCTACTGATATCCACCATCTGTCAGAATGTCTTGTAAACTATCAATGATTCCTGGGAAGCTTCTTAGTTCCTGTGGTACTCTCATTACCAAACACGTGGGAAGCAACAACACCGGCAAGTTTTTACAGCTCTGAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1880950 True 234 lncRNA 0.38 1 59185023 59185256

Neighbor

gene id symbol gene type direction distance location
LOC110498208 LOC106608166 coding upstream 162704 59015463 ~ 59022319 (+)
prlh2r LOC106608506 coding upstream 280858 58895252 ~ 58904165 (+)
LOC110498202 LOC106608562 coding upstream 292282 58883806 ~ 58892741 (+)
disp2 disp2 coding upstream 316050 58855731 ~ 58868973 (+)
degs2 degs2 coding upstream 536271 58639045 ~ 58648752 (+)
LOC110498210 osr1 coding downstream 34780 59220036 ~ 59227518 (+)
rdh14a LOC106607934 coding downstream 297686 59482942 ~ 59488394 (+)
LOC110498214 LOC106607310 coding downstream 554302 59739558 ~ 59760715 (+)
LOC110498234 LOC106607246 coding downstream 588712 59773968 ~ 59799587 (+)
ankef1b LOC106609265 coding downstream 629345 59814601 ~ 59839856 (+)
G1644258 NA non-coding upstream 6364 59178076 ~ 59178659 (+)
G1644245 NA non-coding upstream 14675 59170135 ~ 59170348 (+)
G1644203 NA non-coding upstream 44388 59140205 ~ 59140635 (+)
G1644158 NA non-coding upstream 92923 59087031 ~ 59092100 (+)
G1644157 NA non-coding upstream 98486 59086222 ~ 59086537 (+)
G1644296 NA non-coding downstream 22874 59208130 ~ 59208475 (+)
G1644304 NA non-coding downstream 29047 59214303 ~ 59214537 (+)
G1644313 NA non-coding downstream 42557 59227813 ~ 59228201 (+)
G1644371 NA non-coding downstream 93116 59278372 ~ 59279194 (+)
G1644382 NA non-coding downstream 101260 59286516 ~ 59286746 (+)
G1644123 NA other upstream 127800 59054523 ~ 59057223 (+)
LOC110498189 klhdc1 other upstream 886788 58293310 ~ 58298259 (+)
G1642993 LOC106611338 other upstream 1008538 58164477 ~ 58176485 (+)
G1642565 NA other upstream 1502470 57656349 ~ 57682553 (+)
G1642062 NA other upstream 1908246 57275053 ~ 57276777 (+)
G1644280 NA other downstream 11428 59196684 ~ 59197013 (+)
G1644569 NA other downstream 423344 59608600 ~ 59609394 (+)
G1644651 NA other downstream 562728 59747984 ~ 59748345 (+)
LOC110498402 LOC106604468 other downstream 1198265 60382983 ~ 60392450 (+)
plaat1l LOC106611413 other downstream 1213651 60398860 ~ 60402461 (+)

Expression


Co-expression Network