G1649418


Basic Information

Item Value
gene id G1649418
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 65814564 ~ 65815201 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1887880
TTGTATATATACAAATgctgctgattcatgattttgactggcggagaaacgctgcctgcctgtctgtttcgTCTCGACTCCCGACACATTCATTACTAcaggacagctggagatcgaatttgaatattgaaacaatgttacaaatgtctgagagacagacagcaaggtttataccaatctccactgttgaaaactaattgttagtctaaaagaaatgtgagataatgtctagatgctttttatagtggagaccAAGTTTATACATTCCCTGCCTGGGCTGATGAGATggtggattgcacagtcagatggaacagagtaaataggcattttaatgtcatagatttagccggcgctaacttgtggaatagacaccggctggaatgcgcttttaaccaatcagcattcaggattagacccacccgttgtataatgagCAGTGACTACTTTTTGATCATGTCTGTGGTTACATTTCATTCACTTTTCAACATGGTAAATCTCAGAGTAAAGTGTTGGTTACTTTTAAAACATATATGGTAGAGACGTGGTTTGGACAATTGTTTTTCTGACAGACTTTTCTATAAATCTTGAATGAATTAATAATTTtatgggaaaagtacccaattgtcatacttgagtaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1887880 True 638 lncRNA 0.38 1 65814564 65815201

Neighbor

gene id symbol gene type direction distance location
LOC110498653 atrn coding upstream 6189 65549526 ~ 65812816 (+)
LOC110498317 LOC106600683 coding upstream 287606 65515808 ~ 65526958 (+)
LOC110498315 LOC106606645 coding upstream 523473 65250079 ~ 65291091 (+)
LOC118941380 NA coding upstream 570271 65241682 ~ 65244293 (+)
nat8 LOC106607815 coding upstream 575127 65229684 ~ 65239437 (+)
LOC110498312 LOC106560777 coding downstream 530531 66345732 ~ 66347001 (+)
LOC110498313 LOC106611434 coding downstream 555825 66370807 ~ 66379174 (+)
cfd LOC101448046 coding downstream 903233 66718434 ~ 66723596 (+)
LOC110498318 LOC106560213 coding downstream 1127512 66942713 ~ 66975247 (+)
LOC110498319 pgrmc2 coding downstream 1171630 66986831 ~ 66995509 (+)
G1649300 NA non-coding upstream 83442 65729004 ~ 65731122 (+)
G1649366 NA non-coding upstream 128976 65683911 ~ 65685588 (+)
G1649362 NA non-coding upstream 136642 65676847 ~ 65677922 (+)
G1649326 NA non-coding upstream 195994 65617266 ~ 65618570 (+)
G1649420 NA non-coding downstream 2823 65818024 ~ 65818342 (+)
G1649614 NA non-coding downstream 155304 65970505 ~ 65976240 (+)
G1649616 NA non-coding downstream 166802 65982003 ~ 65982307 (+)
G1649630 NA non-coding downstream 201923 66017124 ~ 66022164 (+)
G1649641 NA non-coding downstream 234117 66049318 ~ 66060285 (+)
G1649319 NA other upstream 212148 65600960 ~ 65602416 (+)
G1649309 NA other upstream 231982 65578439 ~ 65582582 (+)
G1649291 NA other upstream 269509 65544377 ~ 65545055 (+)
G1649268 NA other upstream 351110 65461773 ~ 65463454 (+)

Expression


Co-expression Network