G1649326


Basic Information

Item Value
gene id G1649326
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 65617266 ~ 65618570 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1887779
tctcgctctgtttctctcactctgtttctctcatacggtctctcactctgtctcactCGGTTTCTCTCACTCGgtttttcactctttctctcactcggTTTCTCTCACTCAGTTGCTCTCATACGGTCTCGCTCAGTTCCTCTCATACGGTCTAGCTCAGTTGCTCTCACTCCATTTCTCTCATACGGTCTCGCTCAGTTGctctcatacGGTCTCGCTCAGTTGCTCTCATACGGTCTCGCTCAGTTGCTCTCACTCCATTTCTCCCCAACGTTCTCGCTCAGTTGCTCTCACTCCATTTCTCTCATACAGTCTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1887779 True 317 lncRNA 0.50 2 65617266 65618570

Neighbor

gene id symbol gene type direction distance location
LOC110498317 LOC106600683 coding upstream 90308 65515808 ~ 65526958 (+)
LOC110498315 LOC106606645 coding upstream 326175 65250079 ~ 65291091 (+)
LOC118941380 NA coding upstream 372973 65241682 ~ 65244293 (+)
nat8 LOC106607815 coding upstream 377829 65229684 ~ 65239437 (+)
manba manba coding upstream 474446 65108685 ~ 65142820 (+)
LOC110498312 LOC106560777 coding downstream 727162 66345732 ~ 66347001 (+)
LOC110498313 LOC106611434 coding downstream 752456 66370807 ~ 66379174 (+)
cfd LOC101448046 coding downstream 1099864 66718434 ~ 66723596 (+)
LOC110498318 LOC106560213 coding downstream 1324143 66942713 ~ 66975247 (+)
LOC110498319 pgrmc2 coding downstream 1368261 66986831 ~ 66995509 (+)
G1649321 NA non-coding upstream 8038 65607466 ~ 65609228 (+)
G1649314 NA non-coding upstream 12975 65587884 ~ 65604291 (+)
G1649316 NA non-coding upstream 22354 65588631 ~ 65594912 (+)
G1649313 NA non-coding upstream 25408 65585723 ~ 65591858 (+)
G1649308 NA non-coding upstream 33264 65575722 ~ 65584002 (+)
G1649362 NA non-coding downstream 58277 65676847 ~ 65677922 (+)
G1649366 NA non-coding downstream 65341 65683911 ~ 65685588 (+)
G1649300 NA non-coding downstream 110434 65729004 ~ 65731122 (+)
LOC110498653 atrn non-coding downstream 168756 65549526 ~ 65812816 (+)
G1649418 NA non-coding downstream 195994 65814564 ~ 65815201 (+)
G1649319 NA other upstream 14850 65600960 ~ 65602416 (+)
G1649309 NA other upstream 34684 65578439 ~ 65582582 (+)
G1649291 NA other upstream 72211 65544377 ~ 65545055 (+)
G1649268 NA other upstream 153812 65461773 ~ 65463454 (+)
G1648608 NA other upstream 636323 64980364 ~ 64980943 (+)
G1649614 NA other downstream 352885 65970505 ~ 65976240 (+)

Expression


Co-expression Network