G1649308


Basic Information

Item Value
gene id G1649308
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 65575722 ~ 65584002 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1887754
tggtgattgtagatggtggtggtgattgtagatggtggaggtggtggtggtgattgtaggcaatgttggtgattgtagatggtggtggtgattgtagatggtggtggtgttgattgtaggtggtgattgtagatggtggtggtggtgattgtagatggtggtggtggtgattgttggtggtggtggtggtcatgattgtaggtgatggtggtggtgattgagatggtggtggtgattgtagatggtggtggtggtgttgattgtagacggtggtggtgttgattgtagatggtggtgatggttattgtagatggtggtgatggtgttgattgtaggtgatgttgattgtaggtggtggtgatggttattGTAGATGGTGATTgtaggtggaggtggtggtggtgattgtagatggtggaggtggtggtggtgattgtaggtgatagtgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1887754 True 449 lncRNA 0.48 2 65575722 65584002

Neighbor

gene id symbol gene type direction distance location
LOC110498317 LOC106600683 coding upstream 48764 65515808 ~ 65526958 (+)
LOC110498315 LOC106606645 coding upstream 284631 65250079 ~ 65291091 (+)
LOC118941380 NA coding upstream 331429 65241682 ~ 65244293 (+)
nat8 LOC106607815 coding upstream 336285 65229684 ~ 65239437 (+)
manba manba coding upstream 432902 65108685 ~ 65142820 (+)
LOC110498312 LOC106560777 coding downstream 761730 66345732 ~ 66347001 (+)
LOC110498313 LOC106611434 coding downstream 787024 66370807 ~ 66379174 (+)
cfd LOC101448046 coding downstream 1134432 66718434 ~ 66723596 (+)
LOC110498318 LOC106560213 coding downstream 1358711 66942713 ~ 66975247 (+)
LOC110498319 pgrmc2 coding downstream 1402829 66986831 ~ 66995509 (+)
G1649306 NA non-coding upstream 4339 65570775 ~ 65571383 (+)
G1649295 NA non-coding upstream 27680 65547787 ~ 65548042 (+)
G1649293 NA non-coding upstream 29067 65546308 ~ 65546655 (+)
G1649292 NA non-coding upstream 30386 65545072 ~ 65545336 (+)
G1649281 NA non-coding upstream 51937 65521834 ~ 65523785 (+)
G1649313 NA non-coding downstream 1721 65585723 ~ 65591858 (+)
G1649314 NA non-coding downstream 3882 65587884 ~ 65604291 (+)
G1649316 NA non-coding downstream 4629 65588631 ~ 65594912 (+)
G1649321 NA non-coding downstream 23464 65607466 ~ 65609228 (+)
G1649326 NA non-coding downstream 33264 65617266 ~ 65618570 (+)
G1649291 NA other upstream 30667 65544377 ~ 65545055 (+)
G1649268 NA other upstream 112268 65461773 ~ 65463454 (+)
G1648608 NA other upstream 594779 64980364 ~ 64980943 (+)
G1648296 NA other upstream 1446654 64128208 ~ 64129068 (+)
LOC110498409 LOC106592792 other upstream 2183890 63380908 ~ 63414582 (+)
G1649319 NA other downstream 16958 65600960 ~ 65602416 (+)
LOC110498653 atrn other downstream 150612 65549526 ~ 65812816 (+)
G1649614 NA other downstream 387453 65970505 ~ 65976240 (+)

Expression


Co-expression Network