G1649293


Basic Information

Item Value
gene id G1649293
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 65546308 ~ 65546655 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1887730
ctttaggaaaaatagctacgttgggtgaggcgggttgcaggagagtatttagaagaagttgaggttcagcaaaaagttttaaagatatgtgaagaaagaaaacgaaaacaaacgatatatacaagggacacgacacgacaacacgtcctactgctacgccatcttggaatcaTGACCCTGGTCTCAGAACAGAGGACCTACCATCTATCATGACCCTGGTCTCAGAACAGAGGACCTACCATCTATCATGACCCTGGTCTCAGAACAAAAACCTACCACATGTCATGACCAACACAGCTATGGTAGGACATCGTCTGGCGCATTGTTCCCCCATTAGTAAGCAAGTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1887730 True 348 lncRNA 0.45 1 65546308 65546655

Neighbor

gene id symbol gene type direction distance location
LOC110498317 LOC106600683 coding upstream 19350 65515808 ~ 65526958 (+)
LOC110498315 LOC106606645 coding upstream 255217 65250079 ~ 65291091 (+)
LOC118941380 NA coding upstream 302015 65241682 ~ 65244293 (+)
nat8 LOC106607815 coding upstream 306871 65229684 ~ 65239437 (+)
manba manba coding upstream 403488 65108685 ~ 65142820 (+)
LOC110498653 atrn coding downstream 2871 65549526 ~ 65812816 (+)
LOC110498312 LOC106560777 coding downstream 799077 66345732 ~ 66347001 (+)
LOC110498313 LOC106611434 coding downstream 824371 66370807 ~ 66379174 (+)
cfd LOC101448046 coding downstream 1171779 66718434 ~ 66723596 (+)
LOC110498318 LOC106560213 coding downstream 1396058 66942713 ~ 66975247 (+)
G1649292 NA non-coding upstream 972 65545072 ~ 65545336 (+)
G1649281 NA non-coding upstream 22523 65521834 ~ 65523785 (+)
G1649280 NA non-coding upstream 31767 65514318 ~ 65514541 (+)
G1649276 NA non-coding upstream 70682 65475374 ~ 65475626 (+)
G1649267 NA non-coding upstream 80568 65464562 ~ 65465740 (+)
G1649295 NA non-coding downstream 1132 65547787 ~ 65548042 (+)
G1649306 NA non-coding downstream 24120 65570775 ~ 65571383 (+)
G1649308 NA non-coding downstream 29067 65575722 ~ 65584002 (+)
G1649313 NA non-coding downstream 39068 65585723 ~ 65591858 (+)
G1649314 NA non-coding downstream 41229 65587884 ~ 65604291 (+)
G1649291 NA other upstream 1253 65544377 ~ 65545055 (+)
G1649268 NA other upstream 82854 65461773 ~ 65463454 (+)
G1648608 NA other upstream 565365 64980364 ~ 64980943 (+)
G1648296 NA other upstream 1417240 64128208 ~ 64129068 (+)
LOC110498409 LOC106592792 other upstream 2154476 63380908 ~ 63414582 (+)
G1649309 NA other downstream 31784 65578439 ~ 65582582 (+)
G1649319 NA other downstream 54305 65600960 ~ 65602416 (+)
G1649614 NA other downstream 424800 65970505 ~ 65976240 (+)

Expression


Co-expression Network