G1649281


Basic Information

Item Value
gene id G1649281
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 65521834 ~ 65523785 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1887718
CAGCCTCTGACCCCGGGGGACTCCACTGCAGGCCTGGGAACCCTCTGACCCCGGGGGACTCCACTGCAGGCCTGGGAACCCTCTGACCCCGGGGGACTCCACTGCAGGCCTGGGAACCCTCTGACCCCGGGGGACTCCACTGCAGGCCTGGGAACCCTCCAGGCCAGGTCCTTCATCCCCGTCAGTGGCCCGCTTGGGCCAGTGAAAATAATATTGTAGTAATGCTATTTTTAATCTAggccagtgccttcagaaagtattcataccccttgacctattccacattttgttgttacagcctgatgtTCAAATGAATTAATGTTTTCTCACcgatctacacacacaataccccttaatgacaaggGGATTTTAGCAGATGTATTGAATGAAATgcagaagtattcacacccttgaggcAATGGTTTGTTGAGGCATCTTTCTTTAAGTGCTGTCAAATTGggtattgatcattgctagaaatccattttcaggtcttgccatagattttgctgagCTCCATTTCCTTTtaataaaaaaaactccctagtccttaacgatgacaagtattctgcccttgagttgcgttcccatgcaaaactagacagatagctaacaactaagtcttcaattAAACTCCCAAGGTGTGACTTTTCTTGAATGAATATATTGAAAACGTTAATGTTGTgaaaaaacaaatattttccaaggCTGAAGCGAGACAAGAAATAACTACATTGAAAGACCTGCACCGTACCGTTGTTTGTAGCTGCTTCTATGCGTGCAGAACAaattctctacttcctgtttgTAGTCTTTCTAAGTACCAGAAAGCTCCACTAGGGGGCAAATAACACCATTGAACACAATGAAAATCCAATTTAACCATTGTAATAAATAATCtgttaccttctaacaggatggcagcacgacaagcatacccataacatgatgcagtcaccactgTGTTGTATTGGTTTTTTCCCCAAACAACCCTTTGTTTTCAGGgcaaaaagtgaatttctttgccacattctttgcagtatGACTTTAGTgcattgttgcaaacaggatgcatgttttgggataTTATTCTGTAAGggcttcctccttttcactctttcatttaggtttgtattgtggagtaactacactgttgctccatcctcagttgtctcctatcacagtcattaaactctaactgttttaaagtcaccattggcctcatggtgaaatccctgagcggtttccttcctctctgacaattgcattaggaaggatgcctgtatctttgaagtgactgggtgtattgatacaccatccaatgtgtaattaataacttcttgctcaaagggatattcaatgtctgcttttttttatttttacccatctaccaacagatgcctccctggtctttgtggttaaaactgttttgaaattcactgctagaCTGAGGAACCATAGGTGATTGTATGggcggggtacagagatggggtagtcttTAAAACATCATGTTAAACCCTATTactgcacacagtgagtccatgtaacttagaATGCGGTATTTCAATGTGCCATAAAGGGTTGACTACTTATTGACTctagatatttcagcttttcatcttTATTCATTATTCAACAATTCCATTTGTTGAATTCAATTGTTCAAATGTTGGAATTGTTGAATATCTTGgccgtgttctgttataatctccacccggcacagccacaggccatccctcatagcctggttcctctctaggtttcttcctaggttttggcctttctaggggagtttttcctagccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1887718 True 1806 lncRNA 0.42 2 65521834 65523785

Neighbor

gene id symbol gene type direction distance location
LOC110498315 LOC106606645 coding upstream 230743 65250079 ~ 65291091 (+)
LOC118941380 NA coding upstream 277541 65241682 ~ 65244293 (+)
nat8 LOC106607815 coding upstream 282397 65229684 ~ 65239437 (+)
manba manba coding upstream 379014 65108685 ~ 65142820 (+)
LOC110498306 LOC106563190 coding upstream 418369 65077380 ~ 65103465 (+)
LOC110498653 atrn coding downstream 25741 65549526 ~ 65812816 (+)
LOC110498312 LOC106560777 coding downstream 821947 66345732 ~ 66347001 (+)
LOC110498313 LOC106611434 coding downstream 847241 66370807 ~ 66379174 (+)
cfd LOC101448046 coding downstream 1194649 66718434 ~ 66723596 (+)
LOC110498318 LOC106560213 coding downstream 1418928 66942713 ~ 66975247 (+)
G1649280 NA non-coding upstream 7293 65514318 ~ 65514541 (+)
G1649276 NA non-coding upstream 46208 65475374 ~ 65475626 (+)
G1649267 NA non-coding upstream 56094 65464562 ~ 65465740 (+)
G1649262 NA non-coding upstream 60370 65461077 ~ 65461464 (+)
G1648766 NA non-coding upstream 70904 65448715 ~ 65450930 (+)
G1649292 NA non-coding downstream 21287 65545072 ~ 65545336 (+)
G1649293 NA non-coding downstream 22523 65546308 ~ 65546655 (+)
G1649295 NA non-coding downstream 24002 65547787 ~ 65548042 (+)
G1649306 NA non-coding downstream 46990 65570775 ~ 65571383 (+)
G1649308 NA non-coding downstream 51937 65575722 ~ 65584002 (+)
G1649268 NA other upstream 58380 65461773 ~ 65463454 (+)
G1648608 NA other upstream 540891 64980364 ~ 64980943 (+)
G1648296 NA other upstream 1392766 64128208 ~ 64129068 (+)
LOC110498409 LOC106592792 other upstream 2130002 63380908 ~ 63414582 (+)
G1647477 NA other upstream 2317777 63202756 ~ 63204057 (+)
G1649291 NA other downstream 20592 65544377 ~ 65545055 (+)
G1649309 NA other downstream 54654 65578439 ~ 65582582 (+)
G1649319 NA other downstream 77175 65600960 ~ 65602416 (+)
G1649614 NA other downstream 447670 65970505 ~ 65976240 (+)

Expression


Co-expression Network