G1649262


Basic Information

Item Value
gene id G1649262
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 65461077 ~ 65461464 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1887683
gcagcgGTGAGACTGCCTCTCATCTGACTCACCGTCCCCCCCATctcccaaccctccctccctccgctgagaaaaggggacagtcttccagctgatggccagtctgaggggaggggggagggggggcagcgGTGAGACTGCCTCTCATCTGACTCACCGTCCCCCCCATctcccaaccctccctccctccgctgagaaaaggggaccgtcttccagctgatggcgaaactcaagtcgcactgcattatttctgcctcatgcatcAATTCATGTCCTATAACCAGAGAAGTTGAAATATTCCTCGATAGTAAAAAAGACAAGCAGCAAATAACGCAAGCTTATCGAAACAAGCATTTTATGGCTCATAAAAttgttgaacaaagtgttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1887683 True 388 lncRNA 0.53 1 65461077 65461464

Neighbor

gene id symbol gene type direction distance location
LOC110498315 LOC106606645 coding upstream 169986 65250079 ~ 65291091 (+)
LOC118941380 NA coding upstream 216784 65241682 ~ 65244293 (+)
nat8 LOC106607815 coding upstream 221640 65229684 ~ 65239437 (+)
manba manba coding upstream 318257 65108685 ~ 65142820 (+)
LOC110498306 LOC106563190 coding upstream 357612 65077380 ~ 65103465 (+)
LOC110498317 LOC106600683 coding downstream 54344 65515808 ~ 65526958 (+)
LOC110498653 atrn coding downstream 88062 65549526 ~ 65812816 (+)
LOC110498312 LOC106560777 coding downstream 884268 66345732 ~ 66347001 (+)
LOC110498313 LOC106611434 coding downstream 909562 66370807 ~ 66379174 (+)
cfd LOC101448046 coding downstream 1256970 66718434 ~ 66723596 (+)
G1648735 NA non-coding upstream 4340 65394989 ~ 65456737 (+)
G1648766 NA non-coding upstream 10147 65448715 ~ 65450930 (+)
G1648765 NA non-coding upstream 11796 65448440 ~ 65449281 (+)
G1648762 NA non-coding upstream 20788 65439312 ~ 65440289 (+)
G1648758 NA non-coding upstream 26827 65432825 ~ 65434250 (+)
G1649267 NA non-coding downstream 3098 65464562 ~ 65465740 (+)
G1649276 NA non-coding downstream 13910 65475374 ~ 65475626 (+)
G1649280 NA non-coding downstream 52854 65514318 ~ 65514541 (+)
G1649281 NA non-coding downstream 60370 65521834 ~ 65523785 (+)
G1649292 NA non-coding downstream 83608 65545072 ~ 65545336 (+)
G1648608 NA other upstream 480134 64980364 ~ 64980943 (+)
G1648296 NA other upstream 1332009 64128208 ~ 64129068 (+)
LOC110498409 LOC106592792 other upstream 2069245 63380908 ~ 63414582 (+)
G1647477 NA other upstream 2257020 63202756 ~ 63204057 (+)
G1647411 NA other upstream 2383934 63075149 ~ 63077143 (+)
G1649268 NA other downstream 309 65461773 ~ 65463454 (+)
G1649291 NA other downstream 82913 65544377 ~ 65545055 (+)
G1649309 NA other downstream 116975 65578439 ~ 65582582 (+)
G1649319 NA other downstream 139496 65600960 ~ 65602416 (+)

Expression


Co-expression Network