G1648758


Basic Information

Item Value
gene id G1648758
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 65432825 ~ 65434250 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1886860
atcctacctacagtgtgtagactactccatcctacctacagtgtataggctactccatcctacctacagtgtatagactactccatcctacctacagtgtatagactactccatcctacctacagtgtatagactactccatcctacctacagtgtatagactactccattcagctagtatccctacctacagtgtataggctactccatcctacctacagtgtatagactactccattcagctagtatccctacctacagtgtatagactactccatcctacctgcagtgtatagactactccatcctacctacagtgtatagactactccatcctacctacagtgtatagactactccattcagctagtatccctacctacagtgtacagactactccatcctacctacagtgtataggctactccatcctacctacagtgtatagactactccatcctacctacagtgtgtagactactccatcctacctacagtgtgtagactactccatcctacctacagtgtgtagactactccatcctacctacagtgtgtagactactccatcctacctacagtgtgtagactactccatcctacctacagtgtatagactactccatcctacctacagtgtgtaggctactccatcctacctacagtgtacagactactccatcctacctacagtgtataggctactccatcctacctacagtgtacagactactccattcagctagtatccctacctacagtgtatagactactccatcctacctacagtgtataggctactccat

Function

NR:

description
PREDICTED: putative proline-rich protein 21

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1886860 True 806 lncRNA 0.45 2 65432825 65434250

Neighbor

gene id symbol gene type direction distance location
LOC110498315 LOC106606645 coding upstream 141734 65250079 ~ 65291091 (+)
LOC118941380 NA coding upstream 188532 65241682 ~ 65244293 (+)
nat8 LOC106607815 coding upstream 193388 65229684 ~ 65239437 (+)
manba manba coding upstream 290005 65108685 ~ 65142820 (+)
LOC110498306 LOC106563190 coding upstream 329360 65077380 ~ 65103465 (+)
LOC110498317 LOC106600683 coding downstream 81558 65515808 ~ 65526958 (+)
LOC110498653 atrn coding downstream 115276 65549526 ~ 65812816 (+)
LOC110498312 LOC106560777 coding downstream 911482 66345732 ~ 66347001 (+)
LOC110498313 LOC106611434 coding downstream 936776 66370807 ~ 66379174 (+)
cfd LOC101448046 coding downstream 1284184 66718434 ~ 66723596 (+)
G1648753 NA non-coding upstream 2217 65428293 ~ 65430608 (+)
G1648726 NA non-coding upstream 70300 65362057 ~ 65362525 (+)
G1648706 NA non-coding upstream 99238 65319004 ~ 65333587 (+)
G1648712 NA non-coding upstream 107230 65324947 ~ 65325595 (+)
G1648699 NA non-coding upstream 132587 65298102 ~ 65300238 (+)
G1648762 NA non-coding downstream 5062 65439312 ~ 65440289 (+)
G1648765 NA non-coding downstream 14190 65448440 ~ 65449281 (+)
G1648766 NA non-coding downstream 14465 65448715 ~ 65450930 (+)
G1649262 NA non-coding downstream 26827 65461077 ~ 65461464 (+)
G1649267 NA non-coding downstream 30312 65464562 ~ 65465740 (+)
G1648608 NA other upstream 451882 64980364 ~ 64980943 (+)
G1648296 NA other upstream 1303757 64128208 ~ 64129068 (+)
LOC110498409 LOC106592792 other upstream 2040993 63380908 ~ 63414582 (+)
G1647477 NA other upstream 2228768 63202756 ~ 63204057 (+)
G1647411 NA other upstream 2355682 63075149 ~ 63077143 (+)
G1649268 NA other downstream 27523 65461773 ~ 65463454 (+)
G1649291 NA other downstream 110127 65544377 ~ 65545055 (+)
G1649309 NA other downstream 144189 65578439 ~ 65582582 (+)
G1649319 NA other downstream 166710 65600960 ~ 65602416 (+)

Expression


Co-expression Network