XLOC_036065 (dre-mir-181b-2)


Basic Information

Item Value
gene id XLOC_036065
gene name dre-mir-181b-2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 53023679 ~ 53023764 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00070588
CTAATGACTGCAATAAACATTCATTGCTGTCGGTGGGTTTCTAATAGACACAACTCACTgatcaatgaatgcaaactgcgGTGCAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000081534

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00070588 True 86 miRNA 0.41 1 53023679 53023764

Neighbor

gene id symbol gene type direction distance location
XLOC_036064 dre-mir-181a-2 coding upstream 62 53023539 ~ 53023617 (+)
XLOC_036063 NA coding upstream 4199 53018176 ~ 53019480 (+)
XLOC_036062 NA coding upstream 6122 53017077 ~ 53017557 (+)
XLOC_036060 NA coding upstream 135996 52879425 ~ 52887683 (+)
XLOC_036059 adgrd2 coding upstream 197498 52788997 ~ 52826181 (+)
XLOC_036066 nadka coding downstream 27937 53051701 ~ 53062017 (+)
XLOC_036067 nadka coding downstream 41156 53064920 ~ 53069540 (+)
XLOC_036068 wdr46 coding downstream 56751 53080515 ~ 53096754 (+)
XLOC_036069 nr2c2 coding downstream 96514 53120278 ~ 53142068 (+)
XLOC_036070 NA coding downstream 119447 53143211 ~ 53152093 (+)
XLOC_036058 NA non-coding upstream 243042 52767455 ~ 52780637 (+)
XLOC_036078 CU638702.1 non-coding downstream 472437 53496201 ~ 53498302 (+)
XLOC_036080 NA non-coding downstream 872322 53896086 ~ 53896991 (+)
XLOC_036083 CABZ01066578.1 non-coding downstream 1003918 54027682 ~ 54034515 (+)
XLOC_036086 NA non-coding downstream 1090272 54114036 ~ 54134106 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G2145178 NA non-coding NC_048593.1 CM023247.2 5571203 ~ 5572015 (+)