XLOC_003647 (CU210919.1)


Basic Information

Item Value
gene id XLOC_003647
gene name CU210919.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 39077610 ~ 39083043 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007098
GAAAGTTAGACTTGCCTCCTGACTGTGCTGAGGATCCAGAGTGAAGTGAAGCACTACAGCACACCTCTGGCCTTTAGTTACCGCTGAGACCCCATGAAGATTCTCCTGTCCGGCTCTGAAGCCCACCACTCGACCACACTGAGGCTTCACTGCGGCCTGAAGAGACGggattagaaaaatcagttctgtgattcctgtctaatcaaaccacacatagaagAGCTTTGAGAACTGGGACGTCCTGAAACATCTCACTCGCTGAATGAGGGGATGGCACTGCTTTAAAAGCATCTTGAAGAGCTGCTGTCTGCAATAATGTGCAGATTGGTTAATATAGTGcacaatatttttatccatttcttagtgaatatagGACAACTCGATGTGAACCGCTCAGAACCTCGGAGGTCATGGTTATGGTGATGTCATCAGATGGGAGTTTGCTGGCAGTATCTGGAGCAGCAGCTGGTTTGATTTCTGAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000104449

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007098 True 482 lncRNA 0.47 4 39077610 39083043

Neighbor

gene id symbol gene type direction distance location
XLOC_003644 NA coding upstream 62918 38899701 ~ 39014692 (+)
XLOC_003646 NA coding upstream 109099 38968115 ~ 38968511 (+)
XLOC_003645 NA coding upstream 147372 38929107 ~ 38930238 (+)
XLOC_003643 NA coding upstream 169815 38887882 ~ 38907795 (+)
XLOC_003641 NA coding upstream 201258 38603734 ~ 38876352 (+)
XLOC_003648 C11H1orf50 coding downstream 21976 39105019 ~ 39112255 (+)
XLOC_003649 cdc42 coding downstream 37263 39120306 ~ 39148199 (+)
XLOC_003650 NA coding downstream 65361 39148404 ~ 39151980 (+)
XLOC_003651 NA coding downstream 104488 39187531 ~ 39280891 (+)
XLOC_003652 NA coding downstream 179493 39262536 ~ 39283976 (+)
XLOC_003369 CR854846.2 misc upstream 22954528 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 26365614 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 26383347 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 26392011 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 26397582 12679732 ~ 12680028 (+)
XLOC_003653 NA non-coding downstream 204326 39287369 ~ 39290634 (+)
XLOC_003654 NA non-coding downstream 290669 39373712 ~ 39479267 (+)

Expression


Co-expression Network