RNA id: TCONS_00007098



Basic Information


Item Value
RNA id TCONS_00007098
length 482
lncRNA type antisense
GC content 0.47
exon number 4
gene id XLOC_003647
representative True

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 39077610 ~ 39083043 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


GAAAGTTAGACTTGCCTCCTGACTGTGCTGAGGATCCAGAGTGAAGTGAAGCACTACAGCACACCTCTGGCCTTTAGTTACCGCTGAGACCCCATGAAGATTCTCCTGTCCGGCTCTGAAGCCCACCACTCGACCACACTGAGGCTTCACTGCGGCCTGAAGAGACGggattagaaaaatcagttctgtgattcctgtctaatcaaaccacacatagaagAGCTTTGAGAACTGGGACGTCCTGAAACATCTCACTCGCTGAATGAGGGGATGGCACTGCTTTAAAAGCATCTTGAAGAGCTGCTGTCTGCAATAATGTGCAGATTGGTTAATATAGTGcacaatatttttatccatttcttagtgaatatagGACAACTCGATGTGAACCGCTCAGAACCTCGGAGGTCATGGTTATGGTGATGTCATCAGATGGGAGTTTGCTGGCAGTATCTGGAGCAGCAGCTGGTTTGATTTCTGAA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000168214

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00008663 lncRNA upstream 62918 38947896 ~ 39014692 (+) True XLOC_003644
TCONS_00008662 lncRNA upstream 99078 38947896 ~ 38978532 (+) False XLOC_003644
TCONS_00008414 lncRNA upstream 109099 38968115 ~ 38968511 (+) True XLOC_003646
TCONS_00008660 lncRNA upstream 129001 38899701 ~ 38948609 (+) False XLOC_003644
TCONS_00008659 lncRNA upstream 129001 38899701 ~ 38948609 (+) False XLOC_003644
TCONS_00008664 lncRNA downstream 65361 39148404 ~ 39151980 (+) True XLOC_003650
TCONS_00008666 lncRNA downstream 104488 39187531 ~ 39206145 (+) False XLOC_003651
TCONS_00008665 lncRNA downstream 104488 39187531 ~ 39206145 (+) False XLOC_003651
TCONS_00008667 lncRNA downstream 104488 39187531 ~ 39260038 (+) False XLOC_003651
TCONS_00008668 lncRNA downstream 104488 39187531 ~ 39280891 (+) False XLOC_003651
TCONS_00007093 mRNA upstream 619204 38429319 ~ 38458406 (+) True XLOC_003639
TCONS_00007091 mRNA upstream 656791 38280454 ~ 38420819 (+) False XLOC_003638
TCONS_00007092 mRNA upstream 656791 38332419 ~ 38420819 (+) True XLOC_003638
TCONS_00007089 mRNA upstream 1153723 37905630 ~ 37923887 (+) False XLOC_003635
TCONS_00007099 mRNA downstream 21976 39105019 ~ 39112255 (+) False XLOC_003648
TCONS_00007100 mRNA downstream 24088 39107131 ~ 39112251 (+) True XLOC_003648
TCONS_00007101 mRNA downstream 37263 39120306 ~ 39148199 (+) False XLOC_003649
TCONS_00007102 mRNA downstream 37289 39120332 ~ 39142081 (+) False XLOC_003649
TCONS_00007103 mRNA downstream 52007 39135050 ~ 39148198 (+) False XLOC_003649
TCONS_00007097 other upstream 273872 38803611 ~ 38803738 (+) True XLOC_003642
TCONS_00007094 other upstream 489044 38588451 ~ 38588566 (+) True XLOC_003640
TCONS_00007079 other upstream 1426646 37638982 ~ 37650964 (+) False XLOC_003630
TCONS_00007127 other downstream 1566428 40649471 ~ 40655871 (+) False XLOC_003667
TCONS_00007131 other downstream 1806137 40889180 ~ 40889294 (+) True XLOC_003670
TCONS_00007137 other downstream 2027626 41110669 ~ 41157928 (+) False XLOC_003675
TCONS_00007139 other downstream 2052566 41135609 ~ 41157926 (+) True XLOC_003675
TCONS_00007149 other downstream 2382064 41465107 ~ 41465236 (+) True XLOC_003680

Expression Profile


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