Gene
RNA
| Item | Value |
|---|---|
| gene id | G1738173 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 41150645 ~ 41150864 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1990584 | True | 220 | lncRNA | 0.40 | 1 | 41150645 | 41150864 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500425 | LOC106608993 | coding | upstream | 24711 | 41108446 ~ 41125934 (+) |
| LOC110500424 | LOC106608992 | coding | upstream | 91881 | 41050189 ~ 41058764 (+) |
| LOC110500419 | LOC106608987 | coding | upstream | 295502 | 40846992 ~ 40855143 (+) |
| LOC110500418 | NA | coding | upstream | 313463 | 40794449 ~ 40837182 (+) |
| LOC110500409 | LOC106599480 | coding | upstream | 745805 | 40401452 ~ 40404840 (+) |
| LOC110500431 | LOC106608996 | coding | downstream | 33405 | 41184269 ~ 41201121 (+) |
| prkd4 | LOC106608995 | coding | downstream | 52426 | 41203290 ~ 41215989 (+) |
| LOC110500837 | LOC106608998 | coding | downstream | 73908 | 41224772 ~ 41247133 (+) |
| LOC110500434 | LOC106609000 | coding | downstream | 106459 | 41257323 ~ 41266367 (+) |
| LOC110500843 | LOC106609004 | coding | downstream | 433944 | 41584808 ~ 41601466 (+) |
| G1738172 | NA | non-coding | upstream | 2114 | 41148322 ~ 41148531 (+) |
| G1738170 | NA | non-coding | upstream | 3002 | 41147422 ~ 41147643 (+) |
| G1738167 | NA | non-coding | upstream | 5677 | 41144756 ~ 41144968 (+) |
| G1738166 | NA | non-coding | upstream | 8212 | 41142216 ~ 41142433 (+) |
| G1738163 | NA | non-coding | upstream | 11992 | 41138412 ~ 41138653 (+) |
| G1738174 | NA | non-coding | downstream | 594 | 41151458 ~ 41151698 (+) |
| G1738182 | NA | non-coding | downstream | 16812 | 41167676 ~ 41167955 (+) |
| G1738185 | NA | non-coding | downstream | 22170 | 41173034 ~ 41173319 (+) |
| G1738265 | zg57 | non-coding | downstream | 199626 | 41350490 ~ 41351424 (+) |
| G1738119 | NA | other | upstream | 121509 | 41024710 ~ 41029136 (+) |
| G1738057 | LOC100194703 | other | upstream | 153325 | 40955050 ~ 40997320 (+) |
| G1737866 | LOC103384823 | other | upstream | 596792 | 40552011 ~ 40553853 (+) |
| G1737353 | NA | other | upstream | 1087320 | 40062706 ~ 40063325 (+) |
| G1739103 | NA | other | downstream | 737947 | 41888811 ~ 41897856 (+) |
| cxcl8c | cxcl8c | other | downstream | 1134192 | 42285056 ~ 42288500 (+) |
| si:dkey-185m8.2 | LOC106608874 | other | downstream | 1203713 | 42354556 ~ 42370239 (+) |
| G1739440 | vax2 | other | downstream | 1350485 | 42501349 ~ 42502357 (+) |
| G1740312 | r1441 | other | downstream | 2104789 | 43255653 ~ 43327738 (+) |
