Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110500418 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 40794449 ~ 40837182 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Complement C1q tumor necrosis factor-related protein 3 precursor |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002470101.2 | True | 797 | mRNA | 0.45 | 6 | 40794449 | 40837182 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500409 | LOC106599480 | coding | upstream | 389609 | 40401452 ~ 40404840 (+) |
| LOC110500405 | LOC100194596 | coding | upstream | 441560 | 40322170 ~ 40352889 (+) |
| LOC118942929 | NA | coding | upstream | 537404 | 40255990 ~ 40257045 (+) |
| LOC110500400 | LOC106608974 | coding | upstream | 599975 | 40166092 ~ 40194474 (+) |
| LOC110500398 | LOC106608973 | coding | upstream | 635874 | 40137626 ~ 40158575 (+) |
| LOC110500419 | LOC106608987 | coding | downstream | 9810 | 40846992 ~ 40855143 (+) |
| LOC110500424 | LOC106608992 | coding | downstream | 213007 | 41050189 ~ 41058764 (+) |
| LOC110500425 | LOC106608993 | coding | downstream | 271264 | 41108446 ~ 41125934 (+) |
| LOC110500427 | LOC106608994 | coding | downstream | 293644 | 41130826 ~ 41183998 (+) |
| LOC110500431 | LOC106608996 | coding | downstream | 347087 | 41184269 ~ 41201121 (+) |
| G1737927 | LOC106608986 | non-coding | upstream | 1959 | 40764293 ~ 40792490 (+) |
| G1737936 | NA | non-coding | upstream | 108616 | 40685620 ~ 40685833 (+) |
| G1737923 | NA | non-coding | upstream | 111635 | 40654780 ~ 40682814 (+) |
| G1737905 | NA | non-coding | upstream | 118826 | 40612099 ~ 40675623 (+) |
| G1737865 | NA | non-coding | upstream | 243829 | 40548194 ~ 40550620 (+) |
| G1738034 | NA | non-coding | downstream | 19408 | 40856590 ~ 40856726 (+) |
| G1738047 | NA | non-coding | downstream | 71041 | 40908223 ~ 40908672 (+) |
| G1738048 | LOC100380853 | non-coding | downstream | 71559 | 40908741 ~ 40909526 (+) |
| G1738049 | LOC100380853 | non-coding | downstream | 72659 | 40909841 ~ 40910518 (+) |
| G1737866 | LOC103384823 | other | upstream | 240596 | 40552011 ~ 40553853 (+) |
| G1737353 | NA | other | upstream | 731124 | 40062706 ~ 40063325 (+) |
| G1736484 | LOC106608963 | other | upstream | 917499 | 39875756 ~ 39876950 (+) |
| G1736098 | NA | other | upstream | 1504779 | 39233664 ~ 39289670 (+) |
| G1738057 | LOC100194703 | other | downstream | 155973 | 40955050 ~ 40997320 (+) |
| G1738119 | NA | other | downstream | 187528 | 41024710 ~ 41029136 (+) |
| G1739103 | NA | other | downstream | 1051629 | 41888811 ~ 41897856 (+) |
| cxcl8c | cxcl8c | other | downstream | 1447874 | 42285056 ~ 42288500 (+) |
| si:dkey-185m8.2 | LOC106608874 | other | downstream | 1517395 | 42354556 ~ 42370239 (+) |
