G1759757


Basic Information

Item Value
gene id G1759757
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 61594665 ~ 61596589 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2015192
GGAGTCTTCTGATTCGTCCTCCTGCCTGAATGGGTGAGGCTCCGGGCTAGgaccctcccctccttcctcgtCAACGATCTCATCCAGAGTGACCAATTCTTGAAGGTCTGCCTCATTTATTCCGCTCTCCTGATCCCTcgcaccctcctctcctctctcatccccatCTCCTCCAATCTCATCCAGAGTCACCAACCATTCCGTATCCACACTGAACCTCCCCTTCCCACTCTTCCATTCCTGCTCCTTCTCTCTGCTCCTCACCCGCTTTgtactcctcttctcctcccattCTCTGTCTCGTCGTTTCTCCTTCTTCATCAGCTCTTCCTCTTCGGCAGCGTCGTCAGGGtaactctcctcttcctcactcacCTCATCCAAGGTGACACGGTTAGTCTTTTTGTGGGtacctccctcacccctctccgaCTCCACTGGGGGGGTCTGTGTCTTCTCAGGGGTCTGTATCTTCTCAGGGGTCTGTATCTTCTCAGGGGTCTGTATCTTCTCAGGGGTCTGTGGTATCTTCTTGCCATCCTTCTTTTGAATATTACCCTTTTTGTAACTCGCTTTCTGGGGTTTTGAGGTACCCTTAGATTCAGTAGAATGGTTTTCCAGAGCTTCTGTCGCAGCCACCGGATCATCTACAGAGTCCAGGATGTGGAAcccttccatctctctgggtAGAGAATCTCTTCGGCCGTCAGTGTCTTCTACAGAGTCCAGGATGTGGAAAGCAGATTCTTCTTCGTCTTGCCGTTCCTCTAGAGTAGTTTGGAGCTCCTGGGAACCCGTAGATTCAGAGGCTGCAGGCACCACGGTGTCATCCACGGTTTTGTTGAGTATCTGTAAACCCCGGGGCACTTGGTGACCCGACACCGTCTCAAGCCCTTGTAGTTCTAGGGTTGTTTGAAGGTCTTGCTCCTTGGCTGTGGAAGACGGATCAGTCAAGCCAAGCTCCAGTGTGCAGCCTTCATTCTGAGCCTTGCTACCCAGAATCGAGTCACCTTTTTTAGCCTGGGCCTTCTCCTCGCTCCCGACTACCTCTGGAGGTTTTTCAGCTGTAGTCTCCATATCAATCTCTGACCCAACACTTTCTGCCTCCTTGTTCGCCGGCAATGCCGTGCCCAACACTGACACCTTGTGGTCGGATGACGGTAACATACCCTCCATGTCACTTCCCGTTGTGACCACTACTTCCTCTACCAACTGAGCAGCGGCTGCTTCCCCCATTGGCTGAGACAGACGCTCCACGGGAAGAGGCTCCGCTTCCATCCTGACTGTGGGGTCATCGTCAGTGACAGTTTCTCGGGTTTCTGCGGCTCCCGTCGCAACAACAGCAGCTGCGGCTGACGACCTGGTCTTGCGTCCGGAGGTGGCGGGGGGTTGAGGTTTTGCCGCCTGCGTTTTTTTGGCTGTTGCGGCTTGTCGTGGAGTCTTCTGTCcagggagggtagaggtagaaGAGGATGGGGTGGGAGTGCTTTTGGACAAGGGTCTCTCTTTTTCCTGGCTTGACTTCATAGTAGAAATTGGGGTATCAGGGGTACCCCTCTTGCGTTTGGATGATCGTTCCGACCTTCCATAGGTGCCATCTTGGGTATTGGGTGATGAAGATGATGGCTCTGGTGGGTTgggtgatgaagatgatgattcTGGTGGGTTGGCGTTGTCCGCCTCATCCCCTTCCACCTCGTCCACGGTGACGAACTCATCCATGTTGAACTGGTCCAGGTCGAATGGGTTGGCGTCACCAGGATTGAGGTCGGACGTGAACTCATCCACCACGTAGC
>TU2015194
GGAGTCTTCTGATTCGTCCTCCTGCCTGAATGGGTGAGGCTCCGGGCTAGgaccctcccctccttcctcgtCAACGATCTCATCCAGAGTGACCAATTCTTGAAGGTCTGCCTCATTTATTCCGCTCTCCTGATCCCTcgcaccctcctctcctctctcatccccatCTCCTCCAATCTCATCCAGAGTCACCAACCATTCCGTATCCACACTGAACCTCCCCTTCCCACTCTTCCATTCCTGCTCCTTCTCTCTGCTCCTCACCCGCTTTgtactcctcttctcctcccattCTCTGTCTCGTCGTTTCTCCTTCTTCATCAGCTCTTCCTCTTCGGCAGCGTCGTCAGGGtaactctcctcttcctcactcacCTCATCCAAGGTGACACGGTTAGTCTTTTTGTGGGtacctccctcacccctctccgaCTCCACTGGGGGGGTCTGTATCTTCTCAGGGGTCTGTGTCTTCTCAGGGGTCTGTATCTTCTTGCCATCCTTCTTTTGAATATTACCCTTTTTGTAACTCGCTTTCTGGGGTTTTGAGGTACCCTTAGATTCAGTAGAATGGTTTTCCAGAGCTTCTGTCGCAGCCACCGGATCATCTACAGAGTCCAGGATGTGGAAcccttccatctctctgggtAGAGAATCTCTTCGGCCGTCAGTGTCTTCTACAGAGTCCAGGATGTGGAAAGCAGATTCTTCTTCGTCTTGCCGTTCCTCTAGAGTAGTTTGGAGCTCCTGGGAACCCGTAGATTCAGAGGCTGCAGGCACCACGGTGTCATCCACGGTTTTGTTGAGTATCTGTAAACCCCGGGGCACTTGGTGACCCGACACCGTCTCAAGCCCTTGTAGTTCTAGGGTTGTTTGAAGGTCTTGCTCCTTGGCTGTGGAAGACGGATCAGTCAAGCCAAGCTCCAGTGTGCAGCCTTCATTCTGAGCCTTGCTACCCAGAATCGAGTCACCTTTTTTAGCCTGGGCCTTCTCCTCGCTCCCGACTACCTCTGGAGGTTTTTCAGCTGTAGTCTCCATATCAATCTCTGACCCAACACTTTCTGCCTCCTTGTTCGCCGGCAATGCCGTGCCCAACACTGACACCTTGTGGTCGGATGACGGTAACATACCCTCCATGTCACTTCCCGTTGTGACCACTACTTCCTCTACCAACTGAGCAGCGGCTGCTTCCCCCATTGGCTGAGACAGACGCTCCACGGGAAGAGGCTCCGCTTCCATCCTGACTGTGGGGTCATCGTCAGTGACAGTTTCTCGGGTTTCTGCGGCTCCCGTCGCAACAACAGCAGCTGCGGCTGACGACCTGGTCTTGCGTCCGGAGGTGGCGGGGGGTTGAGGTTTTGCCGCCTGCGTTTTTTTGGCTGTTGCGGCTTGTCGTGGAGTCTTCTGTCcagggagggtagaggtagaaGAGGATGGGGTGGGAGTGCTTTTGGACAAGGGTCTCTCTTTTTCCTGGCTTGACTTCATAGTAGAAATTGGGGTATCAGGGGTACCCCTCTTGCGTTTGGATGATCGTTCCGACCTTCCATAGGTGCCATCTTGGGTATTGGGTGATGAAGATGATGGCTCTGGTGGGTTgggtgatgaagatgatgattcTGGTGGGTTGGCGTTGTCCGCCTCATCCCCTTCCACCTCGTCCACGGTGACGAACTCATCCATGTTGAACTGGTCCAGGTCGAATGGGTTGGCGTCACCAGGATTGAGGTCGGACGTGAACTCATCCACCACGTAGC

Function

NR:

description
flocculation protein FLO11-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2015192 False 1796 lncRNA 0.54 2 61594665 61596589
TU2015194 True 1757 lncRNA 0.54 3 61594665 61596589

Neighbor

gene id symbol gene type direction distance location
LOC110500905 LOC106608450 coding upstream 670574 60900777 ~ 60924091 (+)
LOC118942964 NA coding upstream 784981 60808485 ~ 60809684 (+)
LOC118942963 NA coding upstream 791127 60802393 ~ 60803538 (+)
LOC118942966 NA coding upstream 814823 60778559 ~ 60779842 (+)
LOC118942965 NA coding upstream 820528 60749006 ~ 60774137 (+)
LOC110531293 LOC108431879 coding downstream 129236 61725825 ~ 61804491 (+)
LOC118942795 NA coding downstream 389877 61984438 ~ 61987741 (+)
LOC110512266 NA coding downstream 396182 61992771 ~ 61994235 (+)
LOC118942970 NA coding downstream 431616 62027815 ~ 62032638 (+)
LOC118942796 LOC106578155 coding downstream 471805 62068394 ~ 62076250 (+)
G1759741 NA non-coding upstream 7978 61518485 ~ 61586687 (+)
G1759723 NA non-coding upstream 91178 61503275 ~ 61503487 (+)
G1759716 NA non-coding upstream 107686 61486148 ~ 61486979 (+)
G1759711 NA non-coding upstream 112814 61481607 ~ 61481851 (+)
G1759696 NA non-coding upstream 141529 61452793 ~ 61453136 (+)
G1759759 NA non-coding downstream 4701 61601290 ~ 61602290 (+)
G1759766 NA non-coding downstream 29455 61626044 ~ 61626556 (+)
G1759774 NA non-coding downstream 44608 61641197 ~ 61642205 (+)
G1759775 NA non-coding downstream 46655 61643244 ~ 61644545 (+)
G1759778 LOC106608443 non-coding downstream 55644 61652233 ~ 61654541 (+)
G1759267 NA other upstream 784045 60810202 ~ 60810620 (+)
G1759168 LOC101154678 other upstream 872193 60722158 ~ 60722472 (+)
G1758786 NA other upstream 1235314 60358349 ~ 60359351 (+)
G1758818 NA other upstream 1241631 60351646 ~ 60353092 (+)
G1758801 NA other upstream 1268045 60322215 ~ 60326620 (+)
G1760504 NA other downstream 1138462 62689513 ~ 62741819 (+)
G1760587 NA other downstream 1215186 62811775 ~ 62814241 (+)
LOC110500953 LOC106594432 other downstream 1277092 62873681 ~ 62903536 (+)
LOC110500813 tsc22d4 other downstream 1394581 62991115 ~ 63050683 (+)
G1760800 NA other downstream 1613544 63210133 ~ 63215753 (+)

Expression


Co-expression Network