G1811047 (LOC106582419)


Basic Information

Item Value
gene id G1811047
gene name LOC106582419
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 41612555 ~ 41624781 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2071953
aaaaaaattgtccatataGGTTACGACACATGGGCGGTCGTTATCGTTTCTTCTTTTGCTTTAAAGATTTTCTCCGCTTTACTATCATCTCATATAGTTTGTCCATACCCTCGTGAAGTCCCTCGCCAATGATGGCGCAGCAAGGTTGGACGTGGTATGAGGTGGATGGAGTGAGCTCGTGGAGAGCCAGCTGTTTTTCAATGTCTGCGACTGGAAGAGATTTGGGCAGGTCCTGCTTGTTGGCTATCACCAGAAGAGGTGTCCCCTGGTTCTCTGCGAATTTTGTGACTTTATGCAGTTCTGTTTTAGCCTCCTCCAACCGGTCAACGTCCACTGAGTCCACCACATAAATGATGCCGTCCGTGCACCGACTGTAGGATTTCCACAGGGGCCGCAGCTTCTCCTGACCTCCGACGTCCCAGAAGTGACAACTGATCCCCTTCGCGGTACCATTACTCAGTTTGATTTTCTCAGTGTTGAATCCAATTGTTGGCACAGTGTTTACGAATTCGTTGAATTTCAGACGATAGAGAACAGTCGTTTTGCCAGCGGAATCCAAACCCAGCATCACAATGTGTAGTGATTGGAAAGCAGATATGTTGGAGAAACTGTTGCCCATTCTCGAAACAGTTGAGGGGAACGCCTGGCTCCTTTATGTAGGACCTATCGGATGGCCTAATAGGCTATAGCGTTTTAATATTCAATAGGCTCTTCGATGAATCCACACAAATAATATCAACAAACCTAATGTCAAGGTGTTTACAGGCCCGCCGTGCGCTCTGGCTGGTTGATCCTTGTTTTGCCCTCAGCTGCATTGGTGGACAGTGTCCGCGTCTGTAGGACGCAACGCGGTGGTCATTACAATTCTCCTCACACACTCCAGTTAAGATTCCATGTTGTGACAGTCAAATTCCTCGCACTCACCGAACAGCTTAAGGACGAAAACACCCTCCTTGCGGTCTCTCTGCTGTTTTTCCCGTGAACACTGCGCACTTGTGTCACCCGCGTCTCCTCTGGCACATTGGCTGTCCAAAAAAACTAGCCTCCGTTCCGGGAACGAAAGACATAAATAAATTCACTCCAGAGGTTGTCGATGAGTTCGGGTAATCCTGAGATATGCCTACACTGCGTCCATAAACGACGTTAAAGTTATCGAAGCTATATTTGGGTTGATGTTATGATCTCTATGGTGCGTCACGGCATAAACGGTCCTATCCCTGCGGTCG
>TU2071955
aaaaaaattgtccatataGGTTACGACACATGGGCGGTCGTTATCGTTTCTTCTTTTGCTTTAAAGATTTTCTCCGCTTTACTATCATCTCATATAGTTTGTCCATATACGTTACGACACATGGGCGGTCGTTATCGTTTCTTCTTTTGCTTTAAAGATTTTCTCCGCTTTACTATCATCTCATATAGTTTGTCCATACCCTCGTGAAGTCCCTCGCCAATTATGGCGCAGCAAGGTTGGACGTGGTATGAGGTGGATGGAGTGAGCTCGTGGAGAGCCAGCTGTTTTTCAATGTCTGCGACTGGAAGAGATTTGGGCAGGTCCTGCTTGTTGGCTATCACCAGAAGAGGTGTCCCCTGGTTCTCTGCGAATTTTGTGACTTTATGCAGTTCTGTTTTAGCCTCCTCCAACCGGTCAACGTCCACTGAGTCCACCACATAAATGATGCCGTCCGTGCACCGACTGTAGGATTTCCACAGGGGCCGCAGCTTCTCCTGACCTCCGACGTCCCAGAAGTGACAACTGATCCCCTTCGCGGTACCATTACTCAGTTTGATTTTCTCAGTGTTGAATCCAATTGTTGGCACAGTGTTTACGAATTCGTTGAATTTCAGACGATAGAGAACAGTCGTTTTGCCAGCGGAATCCAAACCCAGCATCACAATGTGTAGTGATTGGAAAGCAGATATGTTGGAGAAACTGTTGCCCATTCTCGAAACAGTTGAGGGGAACGCCTGGCTCCTTTATGTAGGACCTATCGGATGGCCTAATAGGCTATAGCGTTTTAATATTCAATAGGCTCTTCGATGAATCCACACAAATAATATCAACAAACCTAATGTCAAGGTGTTTACAGGCCCGCCGTGCGCTCTGGCTGGTTGATCCTTGTTTTGCCCTCAGCTGCATTGGTGGACAGTGTCCGCGTCTGTAGGACGCAACGCGGTGGTCATTACAATTCTCCTCACACACTCCAGTTAAGATTCCATGTTGTGACAGTCAAATTCCTCGCACTCACCGAACAGCTTAAGGACGAAAACACCCTCCTTGCGGTCTCTCTGCTGTTTTTCCCGTGAACACTGCGCACTTGTGTCACCCGCGTCTCCTCTGGCACATTGGCTGTCCAAAAAAACTAGCCTCCGTTCCGGGAACGAAAGACATAAATAAATTCACTCCAGAGGTTGTCGATGAGTTCGGGTAATCCTGAGATATGCCTACACTGCGTCCATAAACGACGTTAAAGTTATCGAAGCTATATTTGGGTTGATGTTATGATCTCTATGGTGCGTCACGGCATAAACGGTCCTATCCCTGCGGTCG

Function

NR:

description
PREDICTED: ADP-ribosylation factor-like protein 4C

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2071953 False 1226 lncRNA 0.48 2 41612555 41624781
TU2071955 True 1317 lncRNA 0.47 2 41612555 41624781

Neighbor

gene id symbol gene type direction distance location
LOC110502150 NA coding upstream 84419 41526982 ~ 41528136 (+)
LOC110501885 LOC106582417 coding upstream 249429 41286486 ~ 41363126 (+)
LOC110501877 LOC106582405 coding upstream 854329 40745882 ~ 40758226 (+)
LOC110501874 LOC106582403 coding upstream 1053806 40550073 ~ 40558749 (+)
nmi LOC106582386 coding upstream 1111897 40494866 ~ 40500658 (+)
LOC110502132 clm8 coding downstream 316416 41941197 ~ 41943225 (+)
LOC110501889 LOC106582433 coding downstream 631636 42256417 ~ 42389468 (+)
LOC110501894 glpc coding downstream 887192 42511973 ~ 42550970 (+)
LOC110502156 ahr2a coding downstream 990397 42615178 ~ 42685108 (+)
LOC110502157 LOC106582435 coding downstream 1063434 42688215 ~ 42735867 (+)
G1811037 NA non-coding upstream 10884 41601459 ~ 41601671 (+)
G1811018 NA non-coding upstream 29612 41582640 ~ 41582943 (+)
G1811000 NA non-coding upstream 45202 41562928 ~ 41567353 (+)
G1810755 NA non-coding upstream 106381 41505926 ~ 41506174 (+)
G1810717 NA non-coding upstream 181774 41430376 ~ 41430781 (+)
G1811056 NA non-coding downstream 523 41625304 ~ 41626250 (+)
G1811067 NA non-coding downstream 27565 41652346 ~ 41652554 (+)
G1811049 NA non-coding downstream 44168 41668949 ~ 41670878 (+)
G1811121 NA non-coding downstream 109865 41734646 ~ 41735065 (+)
G1811238 NA non-coding downstream 139333 41764114 ~ 41764406 (+)
G1810740 NA other upstream 146206 41464478 ~ 41466349 (+)
G1810553 NA other upstream 420063 41189689 ~ 41192492 (+)
G1809107 NA other upstream 1687160 39924414 ~ 39925395 (+)
G1808787 NA other upstream 1917687 39693913 ~ 39694868 (+)
G1808209 NA other upstream 2461222 39149080 ~ 39151333 (+)
G1812428 NA other downstream 1098891 42723672 ~ 42724114 (+)
G1812953 NA other downstream 1524981 43149762 ~ 43150384 (+)
G1813442 NA other downstream 2483463 44108244 ~ 44110867 (+)

Expression


Co-expression Network