G1812414


Basic Information

Item Value
gene id G1812414
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 42694178 ~ 42694638 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2073421
ATATTTACTGCAGCGTAATGTAACGCtcaatgagtgaatgggtgtggagtcaggcgcagagagcaaaggatgcaggaaaaaacacgctttaatgtccaaaatCAAAGGAACAAAATAGTATTAACCCAACACAGGCGTAACTATAAAAACAAAATAGTACCCTTAGGTAAAATACCAGGACAGCGAGAAAACCCAACAAAACACtaacacctctcacaaatacagaagaacaagcccgcacaaacagaagcgggctaaacaaacttaaataaccccaccctaacgaccaaacaatgaacaggtgaaaccaattagacaaaaccaaacgaacacagaacaaaggatcggtggcagctagtagaccggcgacgacgaccgccgagcgccacccgaacaagaaggggagccaccttcggtggtattCGTGACACGTAAACGCTTCACTCTCATACTGTCATAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2073421 True 461 lncRNA 0.45 1 42694178 42694638

Neighbor

gene id symbol gene type direction distance location
LOC110502156 ahr2a coding upstream 9070 42615178 ~ 42685108 (+)
LOC110501894 glpc coding upstream 143208 42511973 ~ 42550970 (+)
LOC110501889 LOC106582433 coding upstream 304710 42256417 ~ 42389468 (+)
LOC110502132 clm8 coding upstream 750953 41941197 ~ 41943225 (+)
LOC110502150 NA coding upstream 1166042 41526982 ~ 41528136 (+)
LOC110501901 LOC106582440 coding downstream 190073 42884711 ~ 43039681 (+)
LOC110501905 LOC106582444 coding downstream 519202 43213840 ~ 43226393 (+)
LOC110501904 LOC106582430 coding downstream 535786 43230424 ~ 43232133 (+)
LOC110501906 LOC106582445 coding downstream 652165 43346803 ~ 43486763 (+)
LOC110501907 LOC106582447 coding downstream 807155 43501793 ~ 43549935 (+)
G1812261 NA non-coding upstream 26302 42667609 ~ 42667876 (+)
G1812247 psd12 non-coding upstream 88282 42604539 ~ 42605896 (+)
G1812242 NA non-coding upstream 90748 42602097 ~ 42603430 (+)
G1812243 NA non-coding upstream 102068 42591839 ~ 42592110 (+)
G1812415 NA non-coding downstream 1622 42696260 ~ 42696694 (+)
G1812422 NA non-coding downstream 16244 42710882 ~ 42711142 (+)
G1812423 NA non-coding downstream 19549 42714187 ~ 42714426 (+)
G1812424 NA non-coding downstream 20448 42715086 ~ 42715311 (+)
G1812425 NA non-coding downstream 26198 42720836 ~ 42721428 (+)
G1810740 NA other upstream 1227829 41464478 ~ 41466349 (+)
G1810553 NA other upstream 1501686 41189689 ~ 41192492 (+)
G1809107 NA other upstream 2768783 39924414 ~ 39925395 (+)
G1808787 NA other upstream 2999310 39693913 ~ 39694868 (+)
G1812428 NA other downstream 29034 42723672 ~ 42724114 (+)
LOC110502157 LOC106582435 other downstream 34963 42688215 ~ 42735867 (+)
G1812953 NA other downstream 455124 43149762 ~ 43150384 (+)
G1813442 NA other downstream 1413606 44108244 ~ 44110867 (+)
LOC110502169 LOC106582455 other downstream 1623520 44148629 ~ 44324651 (+)

Expression


Co-expression Network