Gene
RNA
| Item | Value |
|---|---|
| gene id | G1813419 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 43967883 ~ 44005825 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2074555 | True | 210 | lncRNA | 0.47 | 3 | 43967883 | 44005825 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943642 | LOC106582432 | coding | upstream | 59063 | 43907659 ~ 43908820 (+) |
| LOC118943641 | LOC106582431 | coding | upstream | 114857 | 43850609 ~ 43853026 (+) |
| LOC110502162 | LOC106582482 | coding | upstream | 323967 | 43641312 ~ 43643916 (+) |
| LOC118943639 | LOC106582449 | coding | upstream | 339991 | 43626441 ~ 43627892 (+) |
| LOC110501909 | LOC106582448 | coding | upstream | 394936 | 43550472 ~ 43572947 (+) |
| LOC110502168 | LOC106582452 | coding | downstream | 18450 | 44024275 ~ 44145882 (+) |
| LOC110502169 | LOC106582455 | coding | downstream | 142804 | 44148629 ~ 44324651 (+) |
| LOC110501911 | LOC106582457 | coding | downstream | 321085 | 44326910 ~ 44351877 (+) |
| LOC110501915 | LOC106582460 | coding | downstream | 375727 | 44381552 ~ 44438653 (+) |
| LOC110502170 | LOC106582462 | coding | downstream | 446427 | 44452252 ~ 44463017 (+) |
| G1813354 | NA | non-coding | upstream | 77572 | 43841540 ~ 43890311 (+) |
| G1813332 | NA | non-coding | upstream | 232150 | 43724577 ~ 43735733 (+) |
| G1813302 | NA | non-coding | upstream | 304200 | 43663195 ~ 43663683 (+) |
| G1813258 | LOC106582449 | non-coding | upstream | 310748 | 43586693 ~ 43657135 (+) |
| G1813439 | NA | non-coding | downstream | 9430 | 44015255 ~ 44015582 (+) |
| G1813475 | NA | non-coding | downstream | 73124 | 44078949 ~ 44087437 (+) |
| G1813481 | NA | non-coding | downstream | 125869 | 44131694 ~ 44132872 (+) |
| G1813485 | NA | non-coding | downstream | 140876 | 44146701 ~ 44146942 (+) |
| G1812953 | NA | other | upstream | 817499 | 43149762 ~ 43150384 (+) |
| LOC110502157 | LOC106582435 | other | upstream | 1232016 | 42688215 ~ 42735867 (+) |
| G1812428 | NA | other | upstream | 1243769 | 42723672 ~ 42724114 (+) |
| LOC110501889 | LOC106582433 | other | upstream | 1578596 | 42256417 ~ 42389468 (+) |
| G1810740 | NA | other | upstream | 2501534 | 41464478 ~ 41466349 (+) |
| G1813442 | NA | other | downstream | 102419 | 44108244 ~ 44110867 (+) |
| G1813588 | ino80d | other | downstream | 356836 | 44362661 ~ 44371923 (+) |
| G1813665 | LOC106582464 | other | downstream | 492632 | 44498457 ~ 44508051 (+) |
| LOC110501918 | LOC106582467 | other | downstream | 561063 | 44566863 ~ 44573921 (+) |
