G1815638


Basic Information

Item Value
gene id G1815638
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 45868451 ~ 45868706 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2077165
CACCGATTCATCTGTTAGCTCAGTAGCTATCACCCATTACACCGATTCATCTGTTAGCTCAGTAGCTATCACCCATAACACCGATTCATCCGTTAGCTCAGTAGCTATCACCCATTACACCGATTCCCCTGTTAGCTCAGTAGCTATCACCCATTGACGCTCTGTTAAAGTCCTATCAATGTACACACTTATTGCCTACCCTCTGTTTTCTTAATTGTGTCAATATGAGCTGAGACTAATTGAAGGGTGAAGGATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2077165 True 256 lncRNA 0.43 1 45868451 45868706

Neighbor

gene id symbol gene type direction distance location
LOC110501937 LOC106582489 coding upstream 27432 45838735 ~ 45841019 (+)
gatd3a LOC106582488 coding upstream 115361 45627869 ~ 45753090 (+)
LOC110501934 LOC106582485 coding upstream 186436 45669820 ~ 45682015 (+)
LOC110502172 fam160a2 coding upstream 212358 45606721 ~ 45656093 (+)
LOC110501945 NA coding upstream 261950 45587722 ~ 45606501 (+)
LOC110501938 LOC106582481 coding downstream 602 45869308 ~ 45871541 (+)
ercc1 ercc1 coding downstream 64099 45932805 ~ 45940900 (+)
LOC110501949 LOC106582502 coding downstream 85657 45954363 ~ 45971125 (+)
LOC100136162 gbp coding downstream 112898 45981604 ~ 46008178 (+)
LOC110501948 LOC106582500 coding downstream 159843 46028549 ~ 46088009 (+)
G1815637 NA non-coding upstream 3242 45864983 ~ 45865209 (+)
G1815628 NA non-coding upstream 20653 45847524 ~ 45847798 (+)
G1815625 NA non-coding upstream 22134 45846100 ~ 45846317 (+)
G1815600 NA non-coding upstream 31967 45836256 ~ 45836484 (+)
G1815598 NA non-coding upstream 34747 45833438 ~ 45833704 (+)
G1815653 NA non-coding downstream 34100 45902806 ~ 45926479 (+)
G1815667 NA non-coding downstream 59102 45927808 ~ 45928285 (+)
G1815657 NA non-coding downstream 73209 45941915 ~ 45943882 (+)
G1815643 NA non-coding downstream 77516 45946222 ~ 45948045 (+)
G1815137 NA other upstream 85915 45781499 ~ 45782536 (+)
G1815113 LOC106582487 other upstream 142123 45725039 ~ 45726328 (+)
LOC110502177 LOC106582482 other upstream 341011 45521920 ~ 45527893 (+)
LOC110501942 atp5g2 other upstream 692979 45172891 ~ 45175477 (+)
G1814811 NA other upstream 757222 45110547 ~ 45111229 (+)
LOC110501947 LOC106582498 other downstream 289953 46157212 ~ 46170323 (+)
G1815855 NA other downstream 307901 46176607 ~ 46177757 (+)
G1816074 NA other downstream 466134 46334840 ~ 46335370 (+)
G1816206 LOC106581610 other downstream 884185 46752891 ~ 46770563 (+)
G1816706 NA other downstream 1215554 47084260 ~ 47085389 (+)

Expression


Co-expression Network