G1815667


Basic Information

Item Value
gene id G1815667
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 45927808 ~ 45928285 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2077198
gtctgagtgcccctggctatctgtaaattatgtctgagtgttggagtgtgcccctggctatctgtaaatgatgtctgagtgttggagtgtgtccctggctatctgtaaatgatgtctgagtgcaggagtgttcccctggctatctgtaaatgatgtctgagtgttggagtgtgtccctggctatctgtaaatgatgtctgagtgttggagtgttcccctggctatctgtaaatgatgtctgagtgttggagtgtgcccctggctatctgtaaattatgtctgagtgttggagtgtgcccctggctatctgtaaatgatgtctgagtgttggagtgtgtccctggctatctgtaaatgatgtctgagtgcaggagtgttcccctggctatctgtaaatgatgtctgagtgttggagtgtgtccctggctatctgtaaatgatgtctgagtgttggagtgttcccctggctatctgtaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2077198 True 478 lncRNA 0.47 1 45927808 45928285

Neighbor

gene id symbol gene type direction distance location
LOC110501938 LOC106582481 coding upstream 56267 45869308 ~ 45871541 (+)
LOC110501937 LOC106582489 coding upstream 86789 45838735 ~ 45841019 (+)
gatd3a LOC106582488 coding upstream 174718 45627869 ~ 45753090 (+)
LOC110501934 LOC106582485 coding upstream 245793 45669820 ~ 45682015 (+)
LOC110502172 fam160a2 coding upstream 271715 45606721 ~ 45656093 (+)
ercc1 ercc1 coding downstream 4520 45932805 ~ 45940900 (+)
LOC110501949 LOC106582502 coding downstream 26078 45954363 ~ 45971125 (+)
LOC100136162 gbp coding downstream 53319 45981604 ~ 46008178 (+)
LOC110501948 LOC106582500 coding downstream 100264 46028549 ~ 46088009 (+)
serpine3 LOC106582496 coding downstream 179009 46107294 ~ 46115457 (+)
G1815653 NA non-coding upstream 1329 45902806 ~ 45926479 (+)
G1815638 NA non-coding upstream 59102 45868451 ~ 45868706 (+)
G1815637 NA non-coding upstream 62599 45864983 ~ 45865209 (+)
G1815628 NA non-coding upstream 80010 45847524 ~ 45847798 (+)
G1815625 NA non-coding upstream 81491 45846100 ~ 45846317 (+)
G1815657 NA non-coding downstream 13630 45941915 ~ 45943882 (+)
G1815643 NA non-coding downstream 17937 45946222 ~ 45948045 (+)
G1815695 NA non-coding downstream 58344 45986629 ~ 45987016 (+)
G1815783 NA non-coding downstream 86735 46015020 ~ 46015271 (+)
G1815137 NA other upstream 145272 45781499 ~ 45782536 (+)
G1815113 LOC106582487 other upstream 201480 45725039 ~ 45726328 (+)
LOC110502177 LOC106582482 other upstream 400368 45521920 ~ 45527893 (+)
LOC110501942 atp5g2 other upstream 752336 45172891 ~ 45175477 (+)
G1814811 NA other upstream 816579 45110547 ~ 45111229 (+)
LOC110501947 LOC106582498 other downstream 230374 46157212 ~ 46170323 (+)
G1815855 NA other downstream 248322 46176607 ~ 46177757 (+)
G1816074 NA other downstream 406555 46334840 ~ 46335370 (+)
G1816206 LOC106581610 other downstream 824606 46752891 ~ 46770563 (+)
G1816706 NA other downstream 1155975 47084260 ~ 47085389 (+)

Expression


Co-expression Network