XLOC_000375 (wbp1lb)


Basic Information

Item Value
gene id XLOC_000375
gene name wbp1lb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 31674297 ~ 31699955 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000643
GTGGAGCTCATGCTGCTGCTGCTCCACTGCTCTGCCTCCCCTCATGACCCAATAAACGGCAGAAGGAGAGTAGGAGGCGGGCGGTGTTCGAGTGACAGCCTTTTACGGTTTCGATTCGATTAACGAACAATAAGTATAGTTACGAGACTAACGCTGTGACCAAAGTCAACACTGAGACATTTGTAATGGTCCGCTAGTCTGTTTAAAATGGGCTTGTTTTTATACATCGCTGGGTCGGCCAACCCCACCGAGGCCACAGTCTATGAGcAGGTACTTCACTGTGAGGGTGTGAATAATAAGAGCTATGTGTGTGAATCAGGACACTGTTGTGGAGAGTCCCAGTGCTGTAGCTACTACTATGAGCTCTGGTGGTTCTGGCTGGTTTGGGCCATCATCTTTATCTTGAGCTGCTGCTGTGTATGTCATCACCGTCGCACCAAACACAGACTACAACAGCAGCAGCGACAGCACGAGATTAACCTCATTGCCTACAGAGAGGTTCACAACCACACATCTCTGCCCTTCTACTTCAGATTCCTACCCAACTCTCTCCTTCCAGAATACGAAGAGGTGGTGCATCGTCCTGCTACTCCTCCTCCCCCTTACAGCGCCTTAAGCAGCGGCCCTCCAACTTACAGCGGCCCTATAACCACAGACCAGCAGGATGTCCACTGCCCACCCCAACAGACCACTCCGGTGCCCCCTGTACCCGACACACCCAGCCTAGAAGAGATCCAAACCTCTGACGGCTACCAGCACAAAGACGACGACAAGGCTGAAATGCAGCTAGAGCGGAGCAGATCCACAGAAACCCCCCTGCCCCAAGATCAGTCTCCTGAAAAGCAGAACGAGTGCAGAAAAGAGCCGCTCAGGAATATGGCCATGCCTGAAGAGAAAGAGCGGATTCAGGGACGGCACCGTCGATTTACTGGGGACTCTGGGATTGAGGTGTGTGTTTGCGGACGAGGCTTAGAGAGTCACGAGCCTAATGAATTCGAGGGGCTTTTGAGTGAGGAGGATCAAGAGGACTCTGAGGACTTCTGTGAGGATTGTATCCTTCAGTCGTATGGAGAGGAAAGTCAAGAACTTCTTTCTCCCGAAAACCGAGTGGAGCGTGGAGCTTCGCCACTGCTTCAGTCTCATCCTGTTTGCCTCTATTTGCATACTATTAATGAACAGGAGGCTCCACATCAGAACAACACAGAATCTTAAAGCTGACTGCATGACTTTACTGATTTAAAGAAAGAAGGGGTGGCCGAGGTGTAAAGAAGATACAATATGCTGTGCAGAGACTATactgtgtatatttgtatataatgaTGTGATAGAAGCAATCGGATGCTCTCCGCCTTGGTTTTGTGTGCAAAGCATCttttaatgcagttttaaaaAGCTCAAAAGGGCCCAAATAAGCTCTACTCCTGTACCAGATGATGTGCCTTATgctaagttcagactgcatgattttcaaagtagtcgtgtcacagatgttttcaccaTGCATGACTATCttggctagcgttttgtcgctgctttgtt

Function

symbol description
wbp1lb Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human WBP1L (WW domain binding protein 1 like).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050522-112 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human WBP1L (WW domain binding protein 1 like).

Ensembl:

ensembl_id ENSDARG00000029751

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000643 True 1539 mRNA 0.49 4 31674297 31699955

Neighbor

gene id symbol gene type direction distance location
XLOC_000374 poll coding upstream 1954 31657842 ~ 31672343 (+)
XLOC_000373 fgf8b coding upstream 4396 31638274 ~ 31669901 (+)
XLOC_000372 slc2a15b coding upstream 75880 31573225 ~ 31598417 (+)
XLOC_000371 CT573247.1 coding upstream 153325 31519239 ~ 31520972 (+)
XLOC_000370 NA coding upstream 314978 31354585 ~ 31359319 (+)
XLOC_000376 as3mt coding downstream 6713 31706668 ~ 31722875 (+)
XLOC_000377 cnnm2b coding downstream 25199 31725154 ~ 31799359 (+)
XLOC_000378 inab coding downstream 164449 31864404 ~ 31867717 (+)
XLOC_000379 anos1a coding downstream 243006 31942961 ~ 31979510 (+)
XLOC_000380 NA coding downstream 310307 32010262 ~ 32011794 (+)
XLOC_000369 NA non-coding upstream 529770 31141119 ~ 31144527 (+)
XLOC_000365 BX548015.2 non-coding upstream 814773 30853969 ~ 30859524 (+)
XLOC_000361 BX255890.2 non-coding upstream 1446792 30227391 ~ 30227505 (+)
XLOC_000381 NA non-coding downstream 311925 32011880 ~ 32012378 (+)
XLOC_000383 BX901898.1 non-coding downstream 317482 32017437 ~ 32018115 (+)
XLOC_000386 CU462859.1 non-coding downstream 814034 32513989 ~ 32514104 (+)
XLOC_000388 CU915272.1 non-coding downstream 1006154 32706109 ~ 32706227 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000049_01872550_01884275 NA coding CI01000049 null 1872550 ~ 1885563 (+)