G1977321


Basic Information

Item Value
gene id G1977321
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 35108609 ~ 35108809 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2260372
gcctgtgtgggtggaccaattcagtttgtctgtgatgtgtacgccgaggaacttaaaactttccatcttctccactactgtcccatcgatgtggatatgggggttgctccctctgctctttcctgaagtccacgatcatctcctttgttttgttgacattgagtgtgaggttattttcctgacaccacactctgagggctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2260372 True 201 lncRNA 0.48 1 35108609 35108809

Neighbor

gene id symbol gene type direction distance location
LOC100305155 LOC106611282 coding upstream 7622 35088694 ~ 35100987 (+)
LOC110505830 LOC106611281 coding upstream 51665 35012695 ~ 35056944 (+)
LOC110505824 snap23 coding upstream 337589 34750884 ~ 34771020 (+)
tmem121aa LOC106602575 coding upstream 422870 34681732 ~ 34685739 (+)
tedc1 LOC106611146 coding upstream 631462 34457515 ~ 34477147 (+)
LOC110505832 mta1 coding downstream 58339 35167148 ~ 35240181 (+)
LOC110505833 LOC106611286 coding downstream 140510 35249319 ~ 35289164 (+)
LOC110504234 LOC106602716 coding downstream 430988 35539797 ~ 35611701 (+)
LOC110504235 LOC106611305 coding downstream 755761 35864570 ~ 35866787 (+)
LOC110505837 LOC106611304 coding downstream 767634 35876443 ~ 35880427 (+)
G1977318 NA non-coding upstream 13135 35095019 ~ 35095474 (+)
G1977298 NA non-coding upstream 56813 35047233 ~ 35051796 (+)
G1977284 NA non-coding upstream 70688 35036122 ~ 35037921 (+)
G1977281 NA non-coding upstream 98879 35009509 ~ 35009730 (+)
G1977324 NA non-coding downstream 4813 35113622 ~ 35113829 (+)
G1977326 NA non-coding downstream 5516 35114325 ~ 35114678 (+)
G1977329 LOC106611283 non-coding downstream 9592 35118401 ~ 35120119 (+)
G1977328 LOC106611283 non-coding downstream 12063 35120872 ~ 35141658 (+)
G1977330 NA non-coding downstream 13921 35122730 ~ 35123951 (+)
G1976689 NA other upstream 377298 34730027 ~ 34731311 (+)
G1976680 NA other upstream 404715 34701980 ~ 34703894 (+)
G1976575 NA other upstream 626688 34481519 ~ 34481921 (+)
G1976574 LOC100194703 other upstream 627330 34480904 ~ 34481279 (+)
G1976573 LOC100194703 other upstream 627712 34480030 ~ 34480897 (+)
G1978080 NA other downstream 917724 36026533 ~ 36027737 (+)
LOC110505847 LOC106611313 other downstream 1280462 36376220 ~ 36824709 (+)
LOC110504241 dnah14 other downstream 2109452 37161387 ~ 37222396 (+)
hivep2b LOC106611354 other downstream 2155971 37264780 ~ 37311200 (+)
G1980026 NA other downstream 2612325 37721134 ~ 37729904 (+)

Expression


Co-expression Network