Gene
RNA
| Item | Value |
|---|---|
| gene id | G1983583 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 41655249 ~ 41655737 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2267749 | True | 258 | lncRNA | 0.39 | 2 | 41655249 | 41655737 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505965 | trim9 | coding | upstream | 32454 | 41547371 ~ 41622795 (+) |
| LOC110504259 | LOC106603281 | coding | upstream | 304500 | 41297432 ~ 41350749 (+) |
| si:ch211-132f19.7 | LOC106611404 | coding | upstream | 764137 | 40868101 ~ 40891112 (+) |
| dnajc27 | LOC106611405 | coding | upstream | 795195 | 40829046 ~ 40860054 (+) |
| pomca | LOC100510783 | coding | upstream | 832423 | 40819696 ~ 40822826 (+) |
| LOC110505960 | LOC106611458 | coding | downstream | 21607 | 41677344 ~ 41737128 (+) |
| LOC110505959 | LOC106611457 | coding | downstream | 84436 | 41740173 ~ 41757394 (+) |
| LOC110504274 | LOC106611444 | coding | downstream | 125534 | 41781271 ~ 41937779 (+) |
| LOC110498275 | sos2 | coding | downstream | 289762 | 41945499 ~ 42020153 (+) |
| LOC110505968 | LOC106591812 | coding | downstream | 398381 | 42054118 ~ 42059358 (+) |
| G1983533 | NA | non-coding | upstream | 27159 | 41626068 ~ 41628090 (+) |
| G1983569 | NA | non-coding | upstream | 53505 | 41601327 ~ 41601744 (+) |
| G1983565 | NA | non-coding | upstream | 63716 | 41591125 ~ 41591533 (+) |
| G1983554 | NA | non-coding | upstream | 96369 | 41557779 ~ 41558880 (+) |
| G1983543 | NA | non-coding | upstream | 128143 | 41526903 ~ 41527106 (+) |
| G1983584 | NA | non-coding | downstream | 5464 | 41661201 ~ 41661706 (+) |
| G1983612 | NA | non-coding | downstream | 74816 | 41730553 ~ 41778877 (+) |
| G1983630 | NA | non-coding | downstream | 98884 | 41754621 ~ 41755446 (+) |
| G1983614 | NA | non-coding | downstream | 102878 | 41758615 ~ 41759925 (+) |
| G1983663 | NA | non-coding | downstream | 192222 | 41847959 ~ 41848335 (+) |
| G1983499 | NA | other | upstream | 205909 | 41448402 ~ 41449340 (+) |
| G1983387 | NA | other | upstream | 438497 | 41215475 ~ 41216752 (+) |
| G1983277 | NA | other | upstream | 607347 | 41047551 ~ 41047902 (+) |
| G1982355 | NA | other | upstream | 1264842 | 40389658 ~ 40390407 (+) |
| G1983721 | NA | other | downstream | 407288 | 42063025 ~ 42103896 (+) |
| G1983777 | NA | other | downstream | 576503 | 42232240 ~ 42232904 (+) |
| G1983836 | NA | other | downstream | 606490 | 42262227 ~ 42262714 (+) |
| cn112 | cn112 | other | downstream | 763423 | 42419107 ~ 42454007 (+) |
