G1983764


Basic Information

Item Value
gene id G1983764
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 42075819 ~ 42076164 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2267992
GGTGTATCAGGCTCTATCAGATTCTCTTATCCTTCCTCTCAGGGTAGGGTGtatcaggctctatcagatcctcttctccttcctctcagggcagggcgtctcaggctctacaCACTCCTGTcacatcctacctggcaggccgctcctaccaggtgacgtggagaggatctgtgtctgcaccacgtactctcactactggtgtcccccagggctcggttctaggtcctcttctctctatacaccaattTTCCAGTCATCTGATGATTCTCAG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106605384, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2267992 True 271 lncRNA 0.53 2 42075819 42076164

Neighbor

gene id symbol gene type direction distance location
LOC110505969 LOC106591813 coding upstream 12036 42059695 ~ 42063783 (+)
LOC110505968 LOC106591812 coding upstream 16461 42054118 ~ 42059358 (+)
LOC110498275 sos2 coding upstream 55666 41945499 ~ 42020153 (+)
LOC110504274 LOC106611444 coding upstream 138040 41781271 ~ 41937779 (+)
LOC110505959 LOC106611457 coding upstream 318425 41740173 ~ 41757394 (+)
LOC110505970 LOC106611462 coding downstream 4429 42080593 ~ 42092048 (+)
LOC110505971 LOC106611464 coding downstream 18913 42095077 ~ 42101228 (+)
LOC110505972 pacs2 coding downstream 31387 42107551 ~ 42226673 (+)
LOC110505975 dcaf5 coding downstream 161131 42237295 ~ 42270066 (+)
LOC110504277 LOC105025529 coding downstream 208582 42284746 ~ 42418042 (+)
G1983761 NA non-coding upstream 2020 42073335 ~ 42073799 (+)
G1983747 NA non-coding upstream 37977 42035315 ~ 42037842 (+)
G1983715 NA non-coding upstream 53292 42021408 ~ 42022527 (+)
G1983737 NA non-coding upstream 104663 41970588 ~ 41971156 (+)
G1983792 NA non-coding downstream 47617 42123781 ~ 42124291 (+)
G1983806 NA non-coding downstream 68706 42144870 ~ 42148110 (+)
G1983829 NA non-coding downstream 135090 42211254 ~ 42213112 (+)
G1983830 NA non-coding downstream 135715 42211879 ~ 42212504 (+)
G1983499 NA other upstream 626479 41448402 ~ 41449340 (+)
LOC110504259 LOC106603281 other upstream 725104 41297432 ~ 41350749 (+)
G1983387 NA other upstream 859067 41215475 ~ 41216752 (+)
G1983277 NA other upstream 1027917 41047551 ~ 41047902 (+)
G1983777 NA other downstream 156076 42232240 ~ 42232904 (+)
G1983836 NA other downstream 186063 42262227 ~ 42262714 (+)
cn112 cn112 other downstream 342996 42419107 ~ 42454007 (+)
LOC110505989 NA other downstream 646811 42722700 ~ 42728639 (+)
G1984581 NA other downstream 891252 42964604 ~ 42975274 (+)

Expression


Co-expression Network