G2028108


Basic Information

Item Value
gene id G2028108
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 38291715 ~ 38293085 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2319564
AACATGTTATGCCCTCTCCACTGGTAGATCAGAGGCAATTAGTAAATTCAACCTCTGCAGGATTGTATTTATGGGAGAAAGATAGAGGCGAGTGAAGCAGTGGTCTGACCTGGAGAGATGTTCTGATATTGTGGCAATGTCTCTTCTAACCGTACATGTGCCCCATGTGGTGGAGGCAATTATTAAACAGGCAAAAATGGCTCATTTGATGCCTGCGAGACTGCTAGACTATCAGAACATTCTTAACCCTTCAACTCTTCTCCCTGCAGCAGAAACCGGTGAAGACCATGACTGTGATGTAGCTATTGAAGCTGACTGTAGCTCTAGGTTGGACTTGAGAGATACCCCATTAGACAATCCAGAATTTTAGTTTTTTTGTAGATGGGTCTGCCCAGAGAAATGAAAAAGGGAATCAATTAGTTGGTTATGCTGTTGTGACTGTTTTGGAACCTGTGGAAAGTGCTCGACTCCCCTCACACGAATCTGCCCAGGCAGCAGAACTATTTGGCTTGACCAGAGCTTATATTTTGGGAAAGGAATGCTCTGTTAACATTTACACTGATTGTAGATCTGAGTTTGGTGTTGTGCATGATTTTGGAACATTGTAGAGGAATAGAGGGTTTTTGACCTTGTCTGAAAAACAGATTGCACACAGTAATCTTGTTTCGTCTCTCTTAGAGGTGGTCCAGCTTCACTCCTCTGTTTCTGTAATCAAGAGTCAGGCGCATTCTTCCTCTAATGACAACATTCCTCTGGGGAACACTAACGCTGACCGCGCAGCTAAATTGGCTGATTCCTCTTCCGTTTCCCCCTCCTTCACATGGCAGCAGTTCCCGCTTCCACTAACCCTTTCTCTGTTAATGACTCTGCAGGCAACGGCTGATGCATCAGAGAAGGACGCCTCGGGTGTATGGCTGGATGAGTGGAGCAGACCCGCCATGCCCCGTTGTACTTTCCAATTCCTTGCCAAATTGTCACATGATCAAGACCATATGTCAAAAAGAGGGATGGTGGATCAcgtaaataaatgaataaataagggaaaggggatacctagtcagttgtacaactgaatgcattcaactgaaatgtgttttccgcatttaacccaacccctctgaatcaaagaggtgcggggggctgatATTGGTGTACAGTAGGTTTTACTGTGCTTGCAGGACATTTCTCTGGTGGTGGGGTTGTACAATGTTTGATTTGCATGACTAACAATGTTGAACCAAACTCTGAAAAAAAATTGTTTAAACTAATTGGTGAAGCAAGCCTGACATGGGTAAAGGTGCTTCCATTGGCACTGAGTATGAGAGGCAGATCCCACACAGTCACTGGTCTCTCTCCACACGAGGTGCTGAC

Function

NR:

description
protein NYNRIN-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2319564 True 1371 lncRNA 0.45 1 38291715 38293085

Neighbor

gene id symbol gene type direction distance location
LOC110506750 LOC106562417 coding downstream 69062 38126089 ~ 38222653 (-)
LOC110506749 NA coding downstream 232693 38056139 ~ 38059022 (-)
LOC118944515 NA coding downstream 490979 37798150 ~ 37800786 (-)
LOC110506744 LOC106562437 coding downstream 983469 37304850 ~ 37308246 (-)
LOC110506741 LOC106587594 coding downstream 1368233 36914774 ~ 36923482 (-)
LOC110506754 LOC106587610 coding upstream 7548 38300633 ~ 38333271 (-)
LOC110506753 LOC106587607 coding upstream 42866 38334242 ~ 38373760 (-)
LOC110506757 LOC106562446 coding upstream 118038 38411123 ~ 38504156 (-)
LOC110526638 LOC107739100 coding upstream 509254 38802339 ~ 38819334 (-)
LOC110506764 LOC106587718 coding upstream 741859 39034944 ~ 39042496 (-)
G2028115 NA non-coding downstream 60 38291389 ~ 38291655 (-)
G2028113 NA non-coding downstream 4885 38286565 ~ 38286830 (-)
G2028111 NA non-coding downstream 5976 38285530 ~ 38285739 (-)
G2028101 NA non-coding downstream 26848 38264590 ~ 38264867 (-)
G2028097 NA non-coding downstream 30737 38260684 ~ 38260978 (-)
G2028109 LOC106562414 non-coding upstream 529 38293614 ~ 38294051 (-)
G2028133 NA non-coding upstream 55795 38348880 ~ 38349115 (-)
G2028135 NA non-coding upstream 57926 38351011 ~ 38351232 (-)
G2028138 NA non-coding upstream 62881 38355966 ~ 38356599 (-)
G2027052 NA other downstream 800299 37490852 ~ 37491416 (-)
G2026993 NA other downstream 870678 37420411 ~ 37421037 (-)
LOC110506740 LOC106562403 other downstream 1415612 36793286 ~ 36913660 (-)
G2025757 NA other downstream 1948281 36343156 ~ 36343434 (-)
LOC110506721 LOC106562390 other downstream 2742958 35401501 ~ 35548790 (-)
G2028777 LOC106587714 other upstream 933278 39226363 ~ 39227059 (-)
G2028779 NA other upstream 936044 39229129 ~ 39233948 (-)
pldn pldn other upstream 1905731 40197134 ~ 40200916 (-)

Expression


Co-expression Network