LOC110506754 (LOC106587610)


Basic Information

Item Value
gene id LOC110506754
gene name LOC106587610
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 38300633 ~ 38333271 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021586600.2
aaatcgTTTTTATTTCTAGGTCTAGGTTTAGGCTAATCTAtatctgggaaactggcccataGTGTTCTTAGTTAGATTGGACAGTAGATGGCAGTAATCCCATCTCTATGACCACACTGCGTAATGTACTCGATCTATTCTATACGTTACAGTACAATTTATTTCAGCTACTCACGTAGCCTACATCTGGGCGGAGGGAGCTAGAACATTCGCATTATTGAATTGTGATGTTCGGATTTATGCATCATtcgttgtaaaaaaaaaaaaacgaccaGCTGATCGAACAACTTGCACAaATATGATATCGCGGATACTCCATAGAGGTGATTTTCTAAACCTGGGGACGAACTTGATGCTGTGTTTTCTCTGTGGGATGACATCGGGAGATCCTACAACAGGAAGTGCATTTGGCTTGATGACAAAATATTCTTTGATTGATGGacaTAATGACCTAGCTTTGATGCTGAGGATTCTCCACGGCAACAGACTGAGTCAGGTTGACCTGCACAACATCAGCAAAGTGGCCACGGACATCAACAGACTCACAACGGGACACGTCGGCGCTCAGGTGTTTGCAGCCTACGTGTTGTGTGGCGCCCAGGCGAAGGATGCTGTGAGGCTCACACTGGAACAGATAGACGTGATCAACCGTATGTGTACGGAGAACCCAGAACTGGAGCTAGTTACATCTGCCAAAGAACTAAATGACACTAACAGGATAGCATGTCTGATCAGCATTGAGGGAGGACATTCAATAGACAGCAGCCTGCCAACCCTGCGTATGTTTTACCAGCTGGGGGTTCGCTCCATGGCCCTCACACACACCTGCAATACACCTTGGGCTGAGTCCTCCTCAACAATTTATGATGTCTATCAAAGAGAAAATGACAGCCTAACAGACTTCGGTAAGgaTGTGGTGAAGGAGATGAACAGATTGGGGATGATAGTAGACCTGTCCCATAGTTCCTGGGCCACAGCCAGGGCAGTACTGCAGATCTCTAAGGCTCCAGTTATTTTCAGCCACTCCTCAGCCCATGCCGTGTGTAACCACAGCCGCAATGTTCCCGATGACCTGCTCCGCGAACTGAAGGAGAACGGAGGACTCATCATGGTTAATCTGCACAGTGGGTTTGTGGCTTGCCATGGCCAAGCCAATATCTCCATTGTGGCTGACCATTTTACCCACATTAGGAAGGTGGTTGGATCTGAGTCAATAGGAATAGGAGGGGACTTTGATGGAGCTTCTAAGTTTCCTCTTGGATTAGAGGATGTGTCCAAGTATCCCGCTCTGATCCAGGAGCTGCTGaagagacactggacagagaacgAGTTGTCCGGGGTCCTCAGACACAACTTCCTACGTGTGTTCAAGGAGGTCGAGAAAgagCGTGACAGGCAGAAAGCGAAAGGAACTCTCCCCAGTGAAGCTCAGATCGACTTGACTGGGGTTCAGAACCCCTGCAGACTGGTACTCAGGCGACCTTACCACCAGACGACAAAGATGGAACAGATGTACTCCAAGGGCCACAGTGAACTGGTGGTCCCCAGGAGTCTGGTCTGGACCATGGTTATACTAATCTCCTGCCTCTGTGTCCTGATGGACCATTAAGACTATAATATGGCCTGGATTCAATCAGATCCAGCGGTAACCCAGGTTGACCGATATCCTGATAGCGGATGTTTTGGCAGTATTGGAGGTGTAGCTGCAGTGTGAACTGACAAATAAGTGTGTGGCTGCTCTTTTGTGTCACCAACCACTCCCTTCCTTATTATCCCTACACATTAGATGTTCAAAACGACAATAGAAAGTGCAGGCTCTATCGACAATAGATATTATGAAATGCATGTTTTCATTTTAATTTGGATGGCGGGATTTATTAGTCTATGTAGACAATAGACCATTACGCATTAGAGTGTTTGAACTTGTAATGTGGCTACATGAACTAACGTGGCTGCATGGGATTTGTTGGATATAAAGTCGGTGTGGTTTCATTGCATCCAATGACAGTGTCCACGATAATGTAACATAAGGAGcagctctaacgcagttccacTTTCAACACTGCCAAAACAACCGGATGTCGACTAGCACGGATCTGAATTTAGCCCTTAGTGTTACTAAACTAGCAGTGCTTGACTTGCGCAGGAGCCCACTggagctgagtaccggcacctcaagTTCACTACTGCTTGAGCTTGTTTTACTCTTATAGAATATTTGCTCAAAAGTAtagtggagctcctgcacctaaatataaacagtacttgcacccaaaatgagtaccggaaccTATTTAGTAGTACTACTAGTGTTGTATTACAATACACTATCCACTACAAACATGTTTCTCCGACAGTAAAAAGCCTAGCTTGAACGTGTTTACTGTGTCACTTGCTTACATGTGATCTTCCCTACAAATAACTTTAcctaatttttttgttgttggtcatTTTGACCTTGAATGAGTTGTATTATTTACACAATGCTCTGCACACACTTGATACTATATTACATTGAGTTTGATGTAACAACTCTTTTTACATATCTCATTCTAAAAATATATTTCTGTTATGTTTGTTTAATGATACAATCAAGGCCACAAGGTCATACTGAGGAATTTACAAACTATCTTTATTTCTCTGAGGACACGGACCTTGATGTCCATCAGACAAACTTGAGTTTCACAATGAAACTGTTTCATAGAAAGACGAGTTCATCTTAAAATGAACATTAATGTAACATTTCCTCACAAGGGTGTACAGTGAAACAGTATGTAacatgttaatatactgtaatgCCTCCTACAGTCATCTCAGGAATGTTGTATTCTGTATTCATAGGTTATATCGTATTTATTTAGCCTTTCTCTTAAGTAAATAATGCTTTGAGTTTTCTGTTTTTCTACCATCTTATTTTATGAACACATTGATATATCTGAAGTCAAGATAGTTCAATTCTGGTTGAATAGGGAAATGAATCATGATTTTATTGGTAAATTCAGATAAATACTCTTCGTCTTTACAGCTCTTGCAGTCTACAGGAAAGAAAAGGAAATGTGTGCATATGCTACTCTGTTCAGGTGGCCCTGTAAGTCGTCTTCATGCCTATAATAATCTATTTTGTACAGAAATAGCAGATTAAATGTAATGTATAATTGTCAA
>XM_036963304.1
aaatcgTTTTTATTTCTAGGTCTAGGTTTAGGCTAATCTAtatctgggaaactggcccataGTGTTCTTAGTTAGATTGGACAGTAGATGGCAGTAATCCCATCTCTATGACCACACTGCGTAATGTACTCGATCTATTCTATACGTTACAGTACAATTTATTTCAGTTACTCACGTAGCCTACATCTGGGCGGAGGGAGCTAGAACATTCGCATTATTGAATTGTGATGTTCGGATTTATGCATCATtcgttgtaaaaaaaaaaaccgaCCAGCTGATCGAACAACTTGCACAaATATGATATCGCGGATACTCCATAGAGGTGATTTTCTAAACCTGGGGACGAACTTGATGCTGTGTTTTCTCTGTGGGATGACATCGGGAGATCCTACAACAGGAAGTGCATTTGGCTTGATGACAAAATATTCTTTGATTGATGGacaTAATGACCTAGCTTTGATGCTGAGGATTCTCCACGGCAACAGACTGAGTCAGGTTGACCTGCACAACATCAGCAAAGTGGCCACGGACATCAACAGACTCACAACGGGACACGTCGGCGCTCAGGTGTTTGCAGCCTACGTGTTGTGTGGCGCCCAGGCGAAGGATGCTGTGAGGCTCACACTGGAACAGATAGACGTGATCAACCGTATGTGTACGGAGAACCCAGAACTGGAGCTAGTTACATCTGCCAAAGAACTAAATGACACTAACAGGATAGCATGTCTGATCAGCATTGAGGGAGGACATTCAATAGACAGCAGCCTGCCAACCCTGCGTATGTTTTACCAGCTGGGGGTTCGCTCCATGGCCCTCACACACACCTGCAATACACCTTGGGCTGAGTCCTCCTCAACAATTTATGATGTCTATCAAAGAGAAAATGACAGCCTAACAGACTTCGGTAAGgaTGTGGTGAAGGAGATGAACAGATTGGGGATGATAGTAGACCTGTCCCATAGTTCCTGGGCCACAGCCAGGGCAGTACTGCAGATCTCTAAGGCTCCAGTTATTTTCAGCCACTCCTCAGCCCATGCCGTGTGTAACCACAGCCGCAATGTTCCCGATGACCTGCTCCGCGAACTGAAGGAGAACGGAGGACTCATCATGGTTAATCTGCACAGTGGGTTTGTGGCTTGCCATGGCCAAGCCAATATCTCCATTGTGGCTGACCATTTTACCCACATTAGGAAGGTGGTTGGATCTGAGTCAATAGGAATAGGAGGGGACTTTGATGGAGCTTCTAAGTTTCCTCTTGGATTAGAGGATGTGTCCAAGTATCCCGCTCTGATCCAGGAGCTGCTGaagagacactggacagagaacgAGTTGTCCGGGGTCCTCAGACACAACTTCCTACGTGTGTTCAAGGAGGTCGAGAAAgagCGTGACAGGCAGAAAGCGAAAGGAACTCTCCCCAGTGAAGCTCAGATCGACTTGACTGGGGTTCAGAACCCCTGCAGACTGGTACTCAGGCGACCTTACCACCAGACGACAAAGATGGAACAGATGTACTCCAAGGGCCACAGTGAACTGGTGGTCCCCAGGAGTCTGGTCTGGACCATGGTTATACTAATCTCCTGCCTCTGTGTCCTGATGGACCATTAAGACTATAATATGGCCTGGATTCAATCAGATCCAGCGGTAACCCAGGTTGACCGATATCCTGATAGCGGATGTTTTGGCAGTATTGGAGGTGTAGCTGCAGTGTGAACTGACAAATAAGTGTGTGGCTGCTCTTTTGTGTCACCAACCACTCCCTTCCTTATTATCCCTACACATTAGATGTTCAAAACGACAATAGAAAGTGCAGGCTCTATCGACAATAGATATTATGAAATGCATGTTTTCATTTTAATTTGGATGGCGGGATTTATTAGTCTATGTAGACAATAGACCATTACGCATTAGAGTGTTTGAACTTGTAATGTGGCTACATGAACTAACGTGGCTGCATGGGATTTGTTGGATATAAAGTCGGTGTGGTTTCATTGCATCCAATGACAGTGTCCACGATAATGTAACATAAGGAGcagctctaacgcagttccacTTTCAACACTGCCAAAACAACCGGATGTCGACTAGCACGGATCTGAATTTAGCCCTTAGTGTTACTAAACTAGCAGTGCTTGACTTGCGCAGGAGCCCACTggagctgagtaccggcacctcaagTTCACTACTGCTTGAGCTTGTTTTACTCTTATAGAATATTTGCTCAAAAGTAtagtggagctcctgcacctaaatataaacagtacttgcacccaaaatgagtaccggaaccTATTTAGTAGTACTACTAGTGTTGTATTACAATACACTATCCACTACAAACATGTTTCTCCGACAGTAAAAAGCCTAGCTTGAACGTGTTTACTGTGTCACTTGCTTACATGTGATCTTCCCTACAAATAACTTTAcctaatttttttgttgttggtcatTTTGACCTTGAATGAGTTGTATTATTTACACAATGCTCTGCACACACTTGATACTATATTACATTGAGTTTGATGTAACAACTCTTTTTACATATCTCATTCTAAAAATATATTTCTGTTATGTTTGTTTAATGATACAATCAAGGCCACAAGGTCATACTGAGGAATTTACAAACTATCTTTATTTCTCTGAGGACACGGACCTTGATGTCCATCAGACAAACTTGAGTTTCACAATGAAACTGTTTCATAGAAAGACGAGTTCATCTTAAAATGAACATTAATGTAACATTTCCTCACAAGGGTGTACAGTGAAACAGTATGTAacatgttaatatactgtaatgCCTCCTACAGTCATCTCAGGAATGTTGTATTCTGTATTCATAGGTTATATCGTATTTATTTAGCCTTTCTCTTAAGTAAATAATGCTTTGAGTTTTCTGTTTTTCTACCATCTTATTTTATGAACACATTGATATATCTGAAGTCAAGATAGTTCAATTCTGGTTGAATAGGGAAATGAATCATGATTTTATTGGTAAATTCAGATAAATACTCTTCGTCTTTACAGCTCTTGCAGTCTACAGGAAAGAAAAGGAAATGTGTGCATATGCTACTCTGTTCAGGTGGCCCTGTAAGTCGTCTTCATGCCTATAATAATCTATTTTGTACAGAAATAGCAGATTAAATGTAATGTATAATTGTCAA

Function

NR:

description
dipeptidase 2-like

GO: NA

KEGG:

id description
K01273 DPEP; membrane dipeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021586600.2 False 3162 mRNA 0.43 11 38300633 38321565
XM_036963304.1 True 3161 mRNA 0.43 11 38300633 38333271

Neighbor

gene id symbol gene type direction distance location
LOC110506750 LOC106562417 coding downstream 77980 38126089 ~ 38222653 (-)
LOC110506749 NA coding downstream 241611 38056139 ~ 38059022 (-)
LOC118944515 NA coding downstream 499897 37798150 ~ 37800786 (-)
LOC110506744 LOC106562437 coding downstream 992387 37304850 ~ 37308246 (-)
LOC110506741 LOC106587594 coding downstream 1377151 36914774 ~ 36923482 (-)
LOC110506753 LOC106587607 coding upstream 2680 38334242 ~ 38373760 (-)
LOC110506757 LOC106562446 coding upstream 77852 38411123 ~ 38504156 (-)
LOC110526638 LOC107739100 coding upstream 469068 38802339 ~ 38819334 (-)
LOC110506764 LOC106587718 coding upstream 701673 39034944 ~ 39042496 (-)
LOC110506767 NA coding upstream 719802 39053073 ~ 39054291 (-)
G2028109 LOC106562414 non-coding downstream 6582 38293614 ~ 38294051 (-)
G2028108 NA non-coding downstream 7548 38291715 ~ 38293085 (-)
G2028115 NA non-coding downstream 8978 38291389 ~ 38291655 (-)
G2028113 NA non-coding downstream 13803 38286565 ~ 38286830 (-)
G2028111 NA non-coding downstream 14894 38285530 ~ 38285739 (-)
G2028133 NA non-coding upstream 15609 38348880 ~ 38349115 (-)
G2028135 NA non-coding upstream 17740 38351011 ~ 38351232 (-)
G2028138 NA non-coding upstream 22695 38355966 ~ 38356599 (-)
G2028140 NA non-coding upstream 71912 38405183 ~ 38407051 (-)
G2027052 NA other downstream 809217 37490852 ~ 37491416 (-)
G2026993 NA other downstream 879596 37420411 ~ 37421037 (-)
LOC110506740 LOC106562403 other downstream 1424530 36793286 ~ 36913660 (-)
G2025757 NA other downstream 1957199 36343156 ~ 36343434 (-)
LOC110506721 LOC106562390 other downstream 2751876 35401501 ~ 35548790 (-)
G2028777 LOC106587714 other upstream 893092 39226363 ~ 39227059 (-)
G2028779 NA other upstream 895858 39229129 ~ 39233948 (-)
pldn pldn other upstream 1865545 40197134 ~ 40200916 (-)

Expression


Co-expression Network