G2080525


Basic Information

Item Value
gene id G2080525
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 38378585 ~ 38378963 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2378974
tctccacccggcacagccagaagaggactggccaccccacatagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaccgtgcttctacacctgcattgcttgctgtttggtgttttaggctgggtttctgtacagcactttgagatatcagctgatgtacgaagggctatataagtacatttgatttgatttgatttgatttattctacctctatctctcttattctatctctatctgtcttATTCTAGCTCTATCTGTCTTATTCTAGCTCCTTATCTCATATTCTACCTCTATCGCTCTTATTCTAGCTCTGTCTCTCTTattctacctctatctctcttattatacc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2378974 True 379 lncRNA 0.42 1 38378585 38378963

Neighbor

gene id symbol gene type direction distance location
LOC110508017 NA coding upstream 318472 38052633 ~ 38060113 (+)
LOC110508012 LOC106581399 coding upstream 809712 37536529 ~ 37568873 (+)
trnat-agu-152 NA coding upstream 872783 37505729 ~ 37505802 (+)
trnat-agu-151 NA coding upstream 872951 37505561 ~ 37505634 (+)
mre11a mre11a coding upstream 1020979 37318716 ~ 37357606 (+)
LOC110507217 NA coding downstream 90955 38469918 ~ 38474599 (+)
LOC110508002 LOC106581401 coding downstream 240587 38619550 ~ 38628170 (+)
LOC118944799 NA coding downstream 660610 39039573 ~ 39039625 (+)
LOC110508028 neus coding downstream 1289026 39667989 ~ 39681560 (+)
LOC110507222 LOC106581437 coding downstream 1315598 39694561 ~ 39701212 (+)
G2080417 NA non-coding upstream 47666 38330496 ~ 38330919 (+)
G2080383 NA non-coding upstream 110682 38266661 ~ 38267903 (+)
G2080348 NA non-coding upstream 138375 38239942 ~ 38240210 (+)
G2080330 NA non-coding upstream 155018 38223355 ~ 38223567 (+)
G2080275 NA non-coding upstream 200919 38177414 ~ 38177666 (+)
G2080551 NA non-coding downstream 21091 38400054 ~ 38400262 (+)
G2080609 NA non-coding downstream 64824 38443787 ~ 38444116 (+)
G2080613 NA non-coding downstream 69172 38448135 ~ 38448359 (+)
G2080616 NA non-coding downstream 70125 38449088 ~ 38449323 (+)
G2080751 NA non-coding downstream 207039 38586002 ~ 38586307 (+)
G2080014 NA other upstream 433434 37944932 ~ 37945151 (+)
G2079657 NA other upstream 559299 37815848 ~ 37819286 (+)
G2079468 LOC106581367 other upstream 1010449 37366739 ~ 37368136 (+)
G2079197 NA other upstream 1097753 37279105 ~ 37280832 (+)
LOC110536894 NA other upstream 1101728 37031161 ~ 37276857 (+)
G2081884 LOC106581433 other downstream 1448695 39827658 ~ 39837383 (+)
LOC110507223 LOC106613251 other downstream 1516704 39781189 ~ 39938079 (+)
G2081949 NA other downstream 1552911 39931874 ~ 39933835 (+)
G2082162 NA other downstream 1578252 39957215 ~ 39957751 (+)
LOC110508042 LOC106613262 other downstream 2464551 40840706 ~ 40847141 (+)

Expression


Co-expression Network