G2080275


Basic Information

Item Value
gene id G2080275
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 38177414 ~ 38177666 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2378706
gaacaaaaggaacatttgttgtgtaactgggagtctcgtgagagaaaacatctgaagatcatcaaaggtaaacgattcatttgattgcttttctgattttcgtgaccaagcttcctgatgctaagtgtacttaatgttttatcgtgcgatcgataaacttacacaaacgcttggattgctttcgctgtaaagcataatttcaaaatctgacacgacagatggattaacaaaaggctaaactgtgttttcctat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2378706 True 253 lncRNA 0.37 1 38177414 38177666

Neighbor

gene id symbol gene type direction distance location
LOC110508017 NA coding upstream 117301 38052633 ~ 38060113 (+)
LOC110508012 LOC106581399 coding upstream 608541 37536529 ~ 37568873 (+)
trnat-agu-152 NA coding upstream 671612 37505729 ~ 37505802 (+)
trnat-agu-151 NA coding upstream 671780 37505561 ~ 37505634 (+)
mre11a mre11a coding upstream 819808 37318716 ~ 37357606 (+)
LOC110507217 NA coding downstream 292252 38469918 ~ 38474599 (+)
LOC110508002 LOC106581401 coding downstream 441884 38619550 ~ 38628170 (+)
LOC118944799 NA coding downstream 861907 39039573 ~ 39039625 (+)
LOC110508028 neus coding downstream 1490323 39667989 ~ 39681560 (+)
LOC110507222 LOC106581437 coding downstream 1516895 39694561 ~ 39701212 (+)
G2080197 NA non-coding upstream 56369 38120457 ~ 38121045 (+)
G2080164 NA non-coding upstream 86238 38090966 ~ 38091176 (+)
G2080139 NA non-coding upstream 110381 38065272 ~ 38067033 (+)
G2080138 NA non-coding upstream 112723 38063663 ~ 38064691 (+)
G2080133 LOC106562215 non-coding upstream 126725 38050331 ~ 38050689 (+)
G2080330 NA non-coding downstream 45689 38223355 ~ 38223567 (+)
G2080348 NA non-coding downstream 62276 38239942 ~ 38240210 (+)
G2080383 NA non-coding downstream 88995 38266661 ~ 38267903 (+)
G2080417 NA non-coding downstream 152830 38330496 ~ 38330919 (+)
G2080525 NA non-coding downstream 200919 38378585 ~ 38378963 (+)
G2080014 NA other upstream 232263 37944932 ~ 37945151 (+)
G2079657 NA other upstream 358128 37815848 ~ 37819286 (+)
G2079468 LOC106581367 other upstream 809278 37366739 ~ 37368136 (+)
G2079197 NA other upstream 896582 37279105 ~ 37280832 (+)
LOC110536894 NA other upstream 900557 37031161 ~ 37276857 (+)
G2081884 LOC106581433 other downstream 1649992 39827658 ~ 39837383 (+)
LOC110507223 LOC106613251 other downstream 1718001 39781189 ~ 39938079 (+)
G2081949 NA other downstream 1754208 39931874 ~ 39933835 (+)
G2082162 NA other downstream 1779549 39957215 ~ 39957751 (+)
LOC110508042 LOC106613262 other downstream 2665848 40840706 ~ 40847141 (+)

Expression


Co-expression Network