G2080164


Basic Information

Item Value
gene id G2080164
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 38090966 ~ 38091176 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2378593
cACTtagatggagtcattaaaactcattttagGAAGAAGCCAcagaaaattacgtggatatattgaagcaacatctcaagacatcagttaagttaaagcttggtcgcaaatgggtcttccaaatggacaatgaccccaagcatacttccaaagttgtggcaaaatggcttaaggacaacaaagtcagggtattggagtggccatcacaaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2378593 True 211 lncRNA 0.40 1 38090966 38091176

Neighbor

gene id symbol gene type direction distance location
LOC110508017 NA coding upstream 30853 38052633 ~ 38060113 (+)
LOC110508012 LOC106581399 coding upstream 522093 37536529 ~ 37568873 (+)
trnat-agu-152 NA coding upstream 585164 37505729 ~ 37505802 (+)
trnat-agu-151 NA coding upstream 585332 37505561 ~ 37505634 (+)
mre11a mre11a coding upstream 733360 37318716 ~ 37357606 (+)
LOC110507217 NA coding downstream 378742 38469918 ~ 38474599 (+)
LOC110508002 LOC106581401 coding downstream 528374 38619550 ~ 38628170 (+)
LOC118944799 NA coding downstream 948397 39039573 ~ 39039625 (+)
LOC110508028 neus coding downstream 1576813 39667989 ~ 39681560 (+)
LOC110507222 LOC106581437 coding downstream 1603385 39694561 ~ 39701212 (+)
G2080139 NA non-coding upstream 23933 38065272 ~ 38067033 (+)
G2080138 NA non-coding upstream 26275 38063663 ~ 38064691 (+)
G2080133 LOC106562215 non-coding upstream 40277 38050331 ~ 38050689 (+)
G2080119 NA non-coding upstream 49490 38041158 ~ 38041476 (+)
G2080080 NA non-coding upstream 82089 38008671 ~ 38008877 (+)
G2080197 NA non-coding downstream 29281 38120457 ~ 38121045 (+)
G2080275 NA non-coding downstream 86238 38177414 ~ 38177666 (+)
G2080330 NA non-coding downstream 132179 38223355 ~ 38223567 (+)
G2080348 NA non-coding downstream 148766 38239942 ~ 38240210 (+)
G2080383 NA non-coding downstream 175485 38266661 ~ 38267903 (+)
G2080014 NA other upstream 145815 37944932 ~ 37945151 (+)
G2079657 NA other upstream 271680 37815848 ~ 37819286 (+)
G2079468 LOC106581367 other upstream 722830 37366739 ~ 37368136 (+)
G2079197 NA other upstream 810134 37279105 ~ 37280832 (+)
LOC110536894 NA other upstream 814109 37031161 ~ 37276857 (+)
G2081884 LOC106581433 other downstream 1736482 39827658 ~ 39837383 (+)
LOC110507223 LOC106613251 other downstream 1804491 39781189 ~ 39938079 (+)
G2081949 NA other downstream 1840698 39931874 ~ 39933835 (+)
G2082162 NA other downstream 1866039 39957215 ~ 39957751 (+)
LOC110508042 LOC106613262 other downstream 2752338 40840706 ~ 40847141 (+)

Expression


Co-expression Network