G2080119


Basic Information

Item Value
gene id G2080119
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 38041158 ~ 38041476 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2378541
gtatgtctctatcagttttgcacatcgagagactgacattttttcccattcctccttgcaaaacagctcgagttcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtgtatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2378541 True 319 lncRNA 0.42 1 38041158 38041476

Neighbor

gene id symbol gene type direction distance location
LOC110508012 LOC106581399 coding upstream 472285 37536529 ~ 37568873 (+)
trnat-agu-152 NA coding upstream 535356 37505729 ~ 37505802 (+)
trnat-agu-151 NA coding upstream 535524 37505561 ~ 37505634 (+)
mre11a mre11a coding upstream 683552 37318716 ~ 37357606 (+)
LOC110536894 NA coding upstream 766076 37031161 ~ 37276857 (+)
LOC110508017 NA coding downstream 11157 38052633 ~ 38060113 (+)
LOC110507217 NA coding downstream 428442 38469918 ~ 38474599 (+)
LOC110508002 LOC106581401 coding downstream 578074 38619550 ~ 38628170 (+)
LOC118944799 NA coding downstream 998097 39039573 ~ 39039625 (+)
LOC110508028 neus coding downstream 1626513 39667989 ~ 39681560 (+)
G2080080 NA non-coding upstream 32281 38008671 ~ 38008877 (+)
G2080074 NA non-coding upstream 40620 38000301 ~ 38000538 (+)
G2080064 NA non-coding upstream 55347 37985421 ~ 37985811 (+)
G2080062 NA non-coding upstream 56397 37984276 ~ 37984761 (+)
G2080048 NA non-coding upstream 65492 37975317 ~ 37975666 (+)
G2080133 LOC106562215 non-coding downstream 8855 38050331 ~ 38050689 (+)
G2080138 NA non-coding downstream 22187 38063663 ~ 38064691 (+)
G2080139 NA non-coding downstream 23796 38065272 ~ 38067033 (+)
G2080164 NA non-coding downstream 49490 38090966 ~ 38091176 (+)
G2080197 NA non-coding downstream 78981 38120457 ~ 38121045 (+)
G2080014 NA other upstream 96007 37944932 ~ 37945151 (+)
G2079657 NA other upstream 221872 37815848 ~ 37819286 (+)
G2079468 LOC106581367 other upstream 673022 37366739 ~ 37368136 (+)
G2079197 NA other upstream 760326 37279105 ~ 37280832 (+)
G2081884 LOC106581433 other downstream 1786182 39827658 ~ 39837383 (+)
LOC110507223 LOC106613251 other downstream 1854191 39781189 ~ 39938079 (+)
G2081949 NA other downstream 1890398 39931874 ~ 39933835 (+)
G2082162 NA other downstream 1915739 39957215 ~ 39957751 (+)
LOC110508042 LOC106613262 other downstream 2802038 40840706 ~ 40847141 (+)

Expression


Co-expression Network