G2080064


Basic Information

Item Value
gene id G2080064
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 37985421 ~ 37985811 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2378486
tgttttaattcccaattaaaattaaacactctgtcaattcataagaatttgtaTGACCCTTATTTTATAGAGATCGACAGAGCCCGGTCTTAAAGTCAAATAGCAGcctttattcacgagagtactgaatacgatacagtttaccacaggttataaactgaaaatgacgtcattagttttaGCACCAACCAGTGCCATCTCCGTTCCAGTACAAAGGCtgtatctcaagccttcccacatccgtctccctaccaatttaatataatttacggCTGAGCCAAGGTTTTCcggtgtagataagcattctagccagtctgaagatTTAGTTAATTCAttcctaccaaggaacagaccgtcattgttctaATCCTTGATTCattcacacacatta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2378486 True 391 lncRNA 0.38 1 37985421 37985811

Neighbor

gene id symbol gene type direction distance location
LOC110508012 LOC106581399 coding upstream 416548 37536529 ~ 37568873 (+)
trnat-agu-152 NA coding upstream 479619 37505729 ~ 37505802 (+)
trnat-agu-151 NA coding upstream 479787 37505561 ~ 37505634 (+)
mre11a mre11a coding upstream 627815 37318716 ~ 37357606 (+)
LOC110536894 NA coding upstream 710339 37031161 ~ 37276857 (+)
LOC110508017 NA coding downstream 66822 38052633 ~ 38060113 (+)
LOC110507217 NA coding downstream 484107 38469918 ~ 38474599 (+)
LOC110508002 LOC106581401 coding downstream 633739 38619550 ~ 38628170 (+)
LOC118944799 NA coding downstream 1053762 39039573 ~ 39039625 (+)
LOC110508028 neus coding downstream 1682178 39667989 ~ 39681560 (+)
G2080062 NA non-coding upstream 660 37984276 ~ 37984761 (+)
G2080048 NA non-coding upstream 9755 37975317 ~ 37975666 (+)
G2079693 NA non-coding upstream 49050 37851007 ~ 37936371 (+)
G2079733 NA non-coding upstream 65699 37919163 ~ 37919722 (+)
G2079690 NA non-coding upstream 141089 37843857 ~ 37844332 (+)
G2080074 NA non-coding downstream 14490 38000301 ~ 38000538 (+)
G2080080 NA non-coding downstream 22860 38008671 ~ 38008877 (+)
G2080119 NA non-coding downstream 55347 38041158 ~ 38041476 (+)
G2080133 LOC106562215 non-coding downstream 64520 38050331 ~ 38050689 (+)
G2080138 NA non-coding downstream 77852 38063663 ~ 38064691 (+)
G2080014 NA other upstream 40270 37944932 ~ 37945151 (+)
G2079657 NA other upstream 166135 37815848 ~ 37819286 (+)
G2079468 LOC106581367 other upstream 617285 37366739 ~ 37368136 (+)
G2079197 NA other upstream 704589 37279105 ~ 37280832 (+)
G2081884 LOC106581433 other downstream 1841847 39827658 ~ 39837383 (+)
LOC110507223 LOC106613251 other downstream 1909856 39781189 ~ 39938079 (+)
G2081949 NA other downstream 1946063 39931874 ~ 39933835 (+)
G2082162 NA other downstream 1971404 39957215 ~ 39957751 (+)
LOC110508042 LOC106613262 other downstream 2857703 40840706 ~ 40847141 (+)

Expression


Co-expression Network