G2080048


Basic Information

Item Value
gene id G2080048
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 37975317 ~ 37975666 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2378470
gttttgcgaatgacacaaatattaattttcacaaagtctgctgcctcagtttgtatgatggcaatttgcatatactccagaatgttatgaagagtgatcagattaattgcaaagtccctctttgccatgcaaatgaactgaatccccaaagaacatttccactgcatttcagccctgacacaaaaggaccagctgacatcatgtcagtgattctctcattaacacaggtgtgagtgttgatgaggacaaggctggagatcactctgtcatgctgattgagtttgaataacagactagaAGCTtcaaaggagggtggtgcttggaatcattgttcttcctctgtcaaccat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2378470 True 350 lncRNA 0.41 1 37975317 37975666

Neighbor

gene id symbol gene type direction distance location
LOC110508012 LOC106581399 coding upstream 406444 37536529 ~ 37568873 (+)
trnat-agu-152 NA coding upstream 469515 37505729 ~ 37505802 (+)
trnat-agu-151 NA coding upstream 469683 37505561 ~ 37505634 (+)
mre11a mre11a coding upstream 617711 37318716 ~ 37357606 (+)
LOC110536894 NA coding upstream 700235 37031161 ~ 37276857 (+)
LOC110508017 NA coding downstream 76967 38052633 ~ 38060113 (+)
LOC110507217 NA coding downstream 494252 38469918 ~ 38474599 (+)
LOC110508002 LOC106581401 coding downstream 643884 38619550 ~ 38628170 (+)
LOC118944799 NA coding downstream 1063907 39039573 ~ 39039625 (+)
LOC110508028 neus coding downstream 1692323 39667989 ~ 39681560 (+)
G2079693 NA non-coding upstream 38946 37851007 ~ 37936371 (+)
G2079733 NA non-coding upstream 55595 37919163 ~ 37919722 (+)
G2079660 NA non-coding upstream 81525 37747612 ~ 37893792 (+)
G2079690 NA non-coding upstream 130985 37843857 ~ 37844332 (+)
G2079661 NA non-coding upstream 151292 37822169 ~ 37824025 (+)
G2080062 NA non-coding downstream 8610 37984276 ~ 37984761 (+)
G2080064 NA non-coding downstream 9755 37985421 ~ 37985811 (+)
G2080074 NA non-coding downstream 24635 38000301 ~ 38000538 (+)
G2080080 NA non-coding downstream 33005 38008671 ~ 38008877 (+)
G2080119 NA non-coding downstream 65492 38041158 ~ 38041476 (+)
G2080014 NA other upstream 30166 37944932 ~ 37945151 (+)
G2079657 NA other upstream 156031 37815848 ~ 37819286 (+)
G2079468 LOC106581367 other upstream 607181 37366739 ~ 37368136 (+)
G2079197 NA other upstream 694485 37279105 ~ 37280832 (+)
G2081884 LOC106581433 other downstream 1851992 39827658 ~ 39837383 (+)
LOC110507223 LOC106613251 other downstream 1920001 39781189 ~ 39938079 (+)
G2081949 NA other downstream 1956208 39931874 ~ 39933835 (+)
G2082162 NA other downstream 1981549 39957215 ~ 39957751 (+)
LOC110508042 LOC106613262 other downstream 2867848 40840706 ~ 40847141 (+)

Expression


Co-expression Network