G2079661


Basic Information

Item Value
gene id G2079661
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 37822169 ~ 37824025 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2378007
AATGAAATAGAATcattttaaaaaggTGTTTaatatgaaaatatatttaatgtTCACGTGATGTCAACATGATGTAGCCACATCAGCTTCCTCAGTCATCCGTCCTACCTGCACTCATAGCCATGGTGGTCCCGGCAACCATCCCCATGGCAGCCATTCCGTTGTTTCTAGGGGCTTGGACCGGGGCGGGGTAGAGGGCTGAGGGCAGGCTGTTTGGCTGAACCACTGTGGTGTGGTGGATTACATGTGGCTGAGGCTGAGCAGCATACACAGGCTGGGTGTAATACGcctacagacacagagacagaggttagagtgtgtctgtgttagtgtgtgtctgtgtgtgttgatgtgtgtgtgcatgtgagtagTGTGTTGATTTACATAGGGCT

Function

NR:

description
PREDICTED: protein FAM168A-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2378007 True 392 lncRNA 0.48 2 37822169 37824025

Neighbor

gene id symbol gene type direction distance location
LOC110508012 LOC106581399 coding upstream 253296 37536529 ~ 37568873 (+)
trnat-agu-152 NA coding upstream 316367 37505729 ~ 37505802 (+)
trnat-agu-151 NA coding upstream 316535 37505561 ~ 37505634 (+)
mre11a mre11a coding upstream 464563 37318716 ~ 37357606 (+)
LOC110536894 NA coding upstream 547087 37031161 ~ 37276857 (+)
LOC110508017 NA coding downstream 228608 38052633 ~ 38060113 (+)
LOC110507217 NA coding downstream 645893 38469918 ~ 38474599 (+)
LOC110508002 LOC106581401 coding downstream 795525 38619550 ~ 38628170 (+)
LOC118944799 NA coding downstream 1215548 39039573 ~ 39039625 (+)
LOC110508028 neus coding downstream 1843964 39667989 ~ 39681560 (+)
G2079657 NA non-coding upstream 2883 37815848 ~ 37819286 (+)
G2079656 NA non-coding upstream 44881 37737520 ~ 37777288 (+)
G2079643 NA non-coding upstream 104608 37717080 ~ 37717561 (+)
G2079621 NA non-coding upstream 150825 37670827 ~ 37671344 (+)
G2079617 NA non-coding upstream 155986 37665813 ~ 37666183 (+)
G2079690 NA non-coding downstream 19832 37843857 ~ 37844332 (+)
G2079693 NA non-coding downstream 26982 37851007 ~ 37936371 (+)
G2079733 NA non-coding downstream 95138 37919163 ~ 37919722 (+)
G2080048 NA non-coding downstream 151292 37975317 ~ 37975666 (+)
G2080062 NA non-coding downstream 160251 37984276 ~ 37984761 (+)
G2079468 LOC106581367 other upstream 454033 37366739 ~ 37368136 (+)
G2079197 NA other upstream 541337 37279105 ~ 37280832 (+)
LOC110508005 LOC106613226 other upstream 1382815 36438225 ~ 36440709 (+)
G2080014 NA other downstream 120907 37944932 ~ 37945151 (+)
G2081884 LOC106581433 other downstream 2003633 39827658 ~ 39837383 (+)
LOC110507223 LOC106613251 other downstream 2071642 39781189 ~ 39938079 (+)
G2081949 NA other downstream 2107849 39931874 ~ 39933835 (+)
G2082162 NA other downstream 2133190 39957215 ~ 39957751 (+)

Expression


Co-expression Network