G2079656


Basic Information

Item Value
gene id G2079656
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 37737520 ~ 37777288 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377935
tgaaaataagaatttgttcttaactgacttgcctagttaaataaaggttaaataaataaaaatatccaCTAATGtatttattacagtagtattcccTTATCCACTAATGTATGAGGTATTTATTACAGTAGTGTTTTGAAGTTCTCTCGCCAGGGTGTTCCTGAAAGGATTATCTGGATAGTCAGTGCTGTGATTTTACAAAGTTCAAAATAAATTGATCTGAAAACCTATTCTAAACATTTTGGTAGCAGTATTTTGACTAAATACAAACAGTCATGTAGTCTGTTTTtgacagtttgtgtgtgttgtctgagGGCAAAGTTTGAATTGGGACCCAGAAGTTAGATGTTTGTACCGTTGGGTGTGAGTTTTTACAATTGTGTATGAAGATTTGAGAAAATGGTGAGTTGTTCCAGGAATTGTGTCTAAGCAATTGAGAAACTGTAAAAGGTATAATCCACCCCGAGAAATGAAACAGGTCAATTTCGTGAAAGCCTATGTTCCATCAGTGGATAAAAACATTTTTCCCTCATGATTTAAATTTTAAGTGGTGCGTCTGCGAAAGCAGGAAATAATGTAGGAACGTGTCATAGCTACATGGTTCTCACCACTGCATATAGTGTGTTTTCTCCTTCAAGTACCATAATGCAATGTGTGTCTGTGGGAAACGTGGGAAAAAGGCATCGTCCTCTGCTCTAGCTTGGTGAGAGAGCCTCCTAAATTGATCATGTAGTTTGTTTAGGTGAtttttaaagctagctagctattttgcATGCTGTTATTGACTTGGCTATTGTGTGTAGTTACGTTCTCCTGATAGCCAGCCCAGAAAGAGAGCATCGCATTGTGCATTTTGTAGCGTAAGTTGACTTGAtctgcaacagatttccacaacgATTTTCAAACGTTGCTACCAACCTTgttataatgacaaaatgaaatgTGTTCacaaatattgttttaacatatttGTGTtatctaaatacacctctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377935 True 993 lncRNA 0.36 2 37737520 37777288

Neighbor

gene id symbol gene type direction distance location
LOC110508012 LOC106581399 coding upstream 168647 37536529 ~ 37568873 (+)
trnat-agu-152 NA coding upstream 231718 37505729 ~ 37505802 (+)
trnat-agu-151 NA coding upstream 231886 37505561 ~ 37505634 (+)
mre11a mre11a coding upstream 379914 37318716 ~ 37357606 (+)
LOC110536894 NA coding upstream 462438 37031161 ~ 37276857 (+)
LOC110508017 NA coding downstream 275345 38052633 ~ 38060113 (+)
LOC110507217 NA coding downstream 692630 38469918 ~ 38474599 (+)
LOC110508002 LOC106581401 coding downstream 842262 38619550 ~ 38628170 (+)
LOC118944799 NA coding downstream 1262285 39039573 ~ 39039625 (+)
LOC110508028 neus coding downstream 1890701 39667989 ~ 39681560 (+)
G2079643 NA non-coding upstream 19959 37717080 ~ 37717561 (+)
G2079608 NA non-coding upstream 52757 37655528 ~ 37684763 (+)
G2079621 NA non-coding upstream 66176 37670827 ~ 37671344 (+)
G2079617 NA non-coding upstream 71337 37665813 ~ 37666183 (+)
G2079610 NA non-coding upstream 76977 37659587 ~ 37660543 (+)
G2079657 NA non-coding downstream 38560 37815848 ~ 37819286 (+)
G2079661 NA non-coding downstream 44881 37822169 ~ 37824025 (+)
G2079690 NA non-coding downstream 66569 37843857 ~ 37844332 (+)
G2079693 NA non-coding downstream 73719 37851007 ~ 37936371 (+)
G2079733 NA non-coding downstream 141875 37919163 ~ 37919722 (+)
G2079468 LOC106581367 other upstream 369384 37366739 ~ 37368136 (+)
G2079197 NA other upstream 456688 37279105 ~ 37280832 (+)
LOC110508005 LOC106613226 other upstream 1298166 36438225 ~ 36440709 (+)
G2078493 NA other upstream 1435478 36263506 ~ 36302664 (+)
G2080014 NA other downstream 167644 37944932 ~ 37945151 (+)
G2081884 LOC106581433 other downstream 2050370 39827658 ~ 39837383 (+)
LOC110507223 LOC106613251 other downstream 2118379 39781189 ~ 39938079 (+)
G2081949 NA other downstream 2154586 39931874 ~ 39933835 (+)

Expression


Co-expression Network