G2079621


Basic Information

Item Value
gene id G2079621
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 37670827 ~ 37671344 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377892
CCTGTGACTTTTAACAGTCATCATCTAGTCTGGTCAAAGGTCAACTATAGAGGGGAGAAAAACAACAgctgatagggttagggttaaccctaaccctacacacaaactacacacacactatacattcgcaaactatacacacacacacacacacacacacacactatacattcgcaaactatacacacacacagacacacaaagcagtggtctaaggcacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377892 True 222 lncRNA 0.43 2 37670827 37671344

Neighbor

gene id symbol gene type direction distance location
LOC110508012 LOC106581399 coding upstream 101954 37536529 ~ 37568873 (+)
trnat-agu-152 NA coding upstream 165025 37505729 ~ 37505802 (+)
trnat-agu-151 NA coding upstream 165193 37505561 ~ 37505634 (+)
mre11a mre11a coding upstream 313221 37318716 ~ 37357606 (+)
LOC110536894 NA coding upstream 395745 37031161 ~ 37276857 (+)
LOC110508017 NA coding downstream 381289 38052633 ~ 38060113 (+)
LOC110507217 NA coding downstream 798574 38469918 ~ 38474599 (+)
LOC110508002 LOC106581401 coding downstream 948206 38619550 ~ 38628170 (+)
LOC118944799 NA coding downstream 1368229 39039573 ~ 39039625 (+)
LOC110508028 neus coding downstream 1996645 39667989 ~ 39681560 (+)
G2079617 NA non-coding upstream 4644 37665813 ~ 37666183 (+)
G2079610 NA non-coding upstream 10284 37659587 ~ 37660543 (+)
G2079607 NA non-coding upstream 16805 37653799 ~ 37654022 (+)
G2079606 NA non-coding upstream 31715 37638886 ~ 37639112 (+)
G2079600 NA non-coding upstream 39652 37627821 ~ 37631175 (+)
G2079643 NA non-coding downstream 45736 37717080 ~ 37717561 (+)
G2079656 NA non-coding downstream 66176 37737520 ~ 37777288 (+)
G2079660 NA non-coding downstream 76268 37747612 ~ 37893792 (+)
G2079657 NA non-coding downstream 144504 37815848 ~ 37819286 (+)
G2079661 NA non-coding downstream 150825 37822169 ~ 37824025 (+)
G2079468 LOC106581367 other upstream 302691 37366739 ~ 37368136 (+)
G2079197 NA other upstream 389995 37279105 ~ 37280832 (+)
LOC110508005 LOC106613226 other upstream 1231473 36438225 ~ 36440709 (+)
G2078493 NA other upstream 1368785 36263506 ~ 36302664 (+)
G2080014 NA other downstream 273588 37944932 ~ 37945151 (+)
G2081884 LOC106581433 other downstream 2156314 39827658 ~ 39837383 (+)
LOC110507223 LOC106613251 other downstream 2224323 39781189 ~ 39938079 (+)
G2081949 NA other downstream 2260530 39931874 ~ 39933835 (+)

Expression


Co-expression Network