G2080885


Basic Information

Item Value
gene id G2080885
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 38806121 ~ 38806353 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2379377
ttcattcctctCCTTTATAAGGTAGTTGTGACATTGTTAGAttagttgttagatattactgcatggtcggaactagaagcacaagcatttcgctacactcacattaacatctgctaaccatgtgtatgtgaccaataaaatttgatttgatttgaactttaAGCCTTAACTTAACTATTCATAATGAATGCCTGTTCTTAACCCATGAGTTGTTTCTATCGGAAGtgtaaccc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2379377 True 233 lncRNA 0.35 1 38806121 38806353

Neighbor

gene id symbol gene type direction distance location
LOC110508002 LOC106581401 coding upstream 177951 38619550 ~ 38628170 (+)
LOC110507217 NA coding upstream 331522 38469918 ~ 38474599 (+)
LOC110508017 NA coding upstream 746008 38052633 ~ 38060113 (+)
LOC110508012 LOC106581399 coding upstream 1237248 37536529 ~ 37568873 (+)
trnat-agu-152 NA coding upstream 1300319 37505729 ~ 37505802 (+)
LOC118944799 NA coding downstream 233220 39039573 ~ 39039625 (+)
LOC110508028 neus coding downstream 861636 39667989 ~ 39681560 (+)
LOC110507222 LOC106581437 coding downstream 888208 39694561 ~ 39701212 (+)
LOC110507223 LOC106613251 coding downstream 974836 39781189 ~ 39938079 (+)
ssr3 LOC106581450 coding downstream 1488478 40294831 ~ 40297552 (+)
G2080824 NA non-coding upstream 128833 38675927 ~ 38677288 (+)
G2080793 NA non-coding upstream 174562 38630760 ~ 38631559 (+)
G2080782 NA non-coding upstream 188239 38617554 ~ 38617882 (+)
G2080781 NA non-coding upstream 188693 38616798 ~ 38617428 (+)
G2080780 NA non-coding upstream 192957 38612775 ~ 38613164 (+)
G2080987 NA non-coding downstream 9230 38815583 ~ 38818121 (+)
G2080988 NA non-coding downstream 10538 38816891 ~ 38817384 (+)
G2080999 NA non-coding downstream 17618 38823971 ~ 38824208 (+)
G2081033 NA non-coding downstream 59086 38865439 ~ 38865678 (+)
G2081057 NA non-coding downstream 80234 38886587 ~ 38886840 (+)
G2080014 NA other upstream 860970 37944932 ~ 37945151 (+)
G2079657 NA other upstream 986835 37815848 ~ 37819286 (+)
G2079468 LOC106581367 other upstream 1437985 37366739 ~ 37368136 (+)
G2079197 NA other upstream 1525289 37279105 ~ 37280832 (+)
LOC110536894 NA other upstream 1529264 37031161 ~ 37276857 (+)
G2081884 LOC106581433 other downstream 1021305 39827658 ~ 39837383 (+)
G2081949 NA other downstream 1125521 39931874 ~ 39933835 (+)
G2082162 NA other downstream 1150862 39957215 ~ 39957751 (+)
LOC110508042 LOC106613262 other downstream 2037161 40840706 ~ 40847141 (+)

Expression


Co-expression Network