G2081796


Basic Information

Item Value
gene id G2081796
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 39701470 ~ 39701755 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2380394
ggggcgagggagggagagagagagagagattctatcAGGAAGCTACATGACACTGTCCTACTGACACAGAGAACAGTGGGGTCAACAGTCAGCCTCCTCGAGCCTCACAACACATCCAACTGGATGTACAACACAGGCATCACAGACATCCCTCTGACCCTccaactccctctctccttcccactttccatctctctccctccctccatgtctcgccctccctccatctccttctcactttccatctttctccctccctccatctctctccctccctccatctccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2380394 True 286 lncRNA 0.55 1 39701470 39701755

Neighbor

gene id symbol gene type direction distance location
LOC110507222 LOC106581437 coding upstream 258 39694561 ~ 39701212 (+)
LOC110508028 neus coding upstream 19910 39667989 ~ 39681560 (+)
LOC118944799 NA coding upstream 661845 39039573 ~ 39039625 (+)
LOC110508002 LOC106581401 coding upstream 1073300 38619550 ~ 38628170 (+)
LOC110507217 NA coding upstream 1226871 38469918 ~ 38474599 (+)
LOC110507223 LOC106613251 coding downstream 79434 39781189 ~ 39938079 (+)
ssr3 LOC106581450 coding downstream 593076 40294831 ~ 40297552 (+)
LOC110508037 LOC106581457 coding downstream 959491 40661246 ~ 40670079 (+)
LOC118944712 NA coding downstream 965262 40667017 ~ 40668632 (+)
LOC110507225 LOC106581476 coding downstream 990648 40692403 ~ 40840064 (+)
G2081792 NA non-coding upstream 7964 39682685 ~ 39693506 (+)
G2081793 NA non-coding upstream 9518 39683582 ~ 39691952 (+)
G2081794 NA non-coding upstream 13722 39686835 ~ 39687748 (+)
G2081783 NA non-coding upstream 44327 39656847 ~ 39657143 (+)
G2081782 NA non-coding upstream 45093 39656178 ~ 39656377 (+)
G2081797 NA non-coding downstream 1704 39703459 ~ 39703984 (+)
G2081800 NA non-coding downstream 7686 39709441 ~ 39709756 (+)
G2081813 NA non-coding downstream 24163 39725918 ~ 39728025 (+)
G2081845 NA non-coding downstream 74407 39776162 ~ 39822521 (+)
G2081909 NA non-coding downstream 156705 39858460 ~ 39862653 (+)
G2080014 NA other upstream 1756319 37944932 ~ 37945151 (+)
G2079657 NA other upstream 1882184 37815848 ~ 37819286 (+)
G2079468 LOC106581367 other upstream 2333334 37366739 ~ 37368136 (+)
G2079197 NA other upstream 2420638 37279105 ~ 37280832 (+)
LOC110536894 NA other upstream 2424613 37031161 ~ 37276857 (+)
G2081884 LOC106581433 other downstream 125903 39827658 ~ 39837383 (+)
G2081949 NA other downstream 230119 39931874 ~ 39933835 (+)
G2082162 NA other downstream 255460 39957215 ~ 39957751 (+)
LOC110508042 LOC106613262 other downstream 1141759 40840706 ~ 40847141 (+)

Expression


Co-expression Network