G2127282


Basic Information

Item Value
gene id G2127282
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 30604473 ~ 30604705 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2432245
gcttcacctggaatgcttttccaacagtcttcaaggagttcctacatatgctgagcacttgttggctgcttttccttcactctgtggtccaactcatcccaaaccatctcaattgggttgaagtcaggtgattgtggaggccaggtcatctgatgcagcactccatcactctccttcttggtaaaattgcccttacacagcctggaggtgtgttttgggtcattgtcctgttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2432245 True 233 lncRNA 0.48 1 30604473 30604705

Neighbor

gene id symbol gene type direction distance location
kcnn1a LOC106598974 coding upstream 12076 30534338 ~ 30592397 (+)
si:rp71-39b20.4 LOC106598976 coding upstream 138232 30461480 ~ 30466241 (+)
LOC110508915 LOC106598984 coding upstream 208561 30374871 ~ 30395912 (+)
rs15 rig coding upstream 230226 30368374 ~ 30374247 (+)
LOC118944906 NA coding upstream 233219 30371122 ~ 30371254 (+)
zgc:154006 LOC106598968 coding downstream 3582 30608287 ~ 30629821 (+)
LOC110508925 LOC106598970 coding downstream 53777 30658482 ~ 30666503 (+)
LOC110508926 tm16h coding downstream 74939 30679644 ~ 30700351 (+)
LOC110508929 LOC106598953 coding downstream 102549 30707254 ~ 30716642 (+)
LOC110508930 LOC106598949 coding downstream 116393 30721098 ~ 30751910 (+)
G2127274 NA non-coding upstream 23396 30580867 ~ 30581077 (+)
G2127240 NA non-coding upstream 78333 30525937 ~ 30526140 (+)
G2127234 NA non-coding upstream 84246 30519153 ~ 30520227 (+)
G2127233 NA non-coding upstream 86596 30517540 ~ 30517877 (+)
G2127225 NA non-coding upstream 92394 30511838 ~ 30512079 (+)
LOC110508922 ocel1 non-coding downstream 2075 30595929 ~ 30608022 (+)
G2127293 NA non-coding downstream 21131 30625836 ~ 30626511 (+)
G2127252 LOC106598972 non-coding downstream 25246 30629951 ~ 30632503 (+)
G2127294 NA non-coding downstream 28829 30633534 ~ 30634011 (+)
G2127303 NA non-coding downstream 39949 30644654 ~ 30645433 (+)
G2126497 NA other upstream 392840 30210247 ~ 30211633 (+)
G2125614 LOC106599059 other upstream 1281089 29320743 ~ 29323384 (+)
LOC110508880 NA other upstream 1330022 29270737 ~ 29274454 (+)
LOC110508851 LOC106599130 other upstream 2066061 28522217 ~ 28551515 (+)
G2127299 LOC106598972 other downstream 35982 30640687 ~ 30641243 (+)
LOC110508221 LOC106598877 other downstream 1035597 31594783 ~ 31643462 (+)
G2128189 NA other downstream 1134607 31739312 ~ 31740070 (+)
G2128614 NA other downstream 1340459 31945164 ~ 31948898 (+)
LOC110508984 NA other downstream 1448971 32053231 ~ 32055655 (+)

Expression


Co-expression Network