XLOC_004053 (FP016142.3)


Basic Information

Item Value
gene id XLOC_004053
gene name FP016142.3
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 15798258 ~ 15799923 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007731
AATCCATCTcgcgatattgtatcacttcaggtacgcgcctactgatttgttgattcaaacgagttgtgaatcaagaagcctctaaagatccgaatcaaactgcagcagcacgccacgaggttttgctcagactaatcgtaacaatagccttatttactgacaacgatttactcacatagcagcaagacccatgggatttcatcagccactcaccatcagagtcctcagtggaagctgagaagagcagaagaggaagccaagcaagagatgccagaaaaaaagggggaaggaaataatgtgttattttgctgtttgagtataggcaggcgcagtgggtagcacaatcgcctcacagcaagaaggtcgctggttcgagcctcggctgggtcagttggcatttctgtgtggagtttgcatgttctccccatgttagcgtgggtttcctccgggtgct

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000099688

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007731 True 454 lncRNA 0.48 2 15798258 15799923

Neighbor

gene id symbol gene type direction distance location
XLOC_004052 FP016142.4 coding downstream 690 15796093 ~ 15797568 (-)
XLOC_004051 FP016142.5 coding downstream 17335 15775452 ~ 15780923 (-)
XLOC_004050 NA coding downstream 36387 15756726 ~ 15761871 (-)
XLOC_004049 ghrh coding downstream 362763 15345654 ~ 15435495 (-)
XLOC_004048 NA coding downstream 484659 15311381 ~ 15313599 (-)
XLOC_004054 FP016142.7 coding upstream 2527 15802450 ~ 15803637 (-)
XLOC_004055 FP016142.1 coding upstream 6469 15806392 ~ 15809019 (-)
XLOC_004056 rap1ab coding upstream 33642 15833565 ~ 15875054 (-)
XLOC_004057 FP003590.1 coding upstream 45665 15845588 ~ 15846513 (-)
XLOC_004058 zgc:173544 coding upstream 214604 16014527 ~ 16021522 (-)
XLOC_004019 CR450764.8 misc downstream 3106567 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 3176491 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 3206962 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 3284996 12512966 ~ 12513262 (-)
XLOC_004006 BX000700.27 misc downstream 3297996 12499966 ~ 12500262 (-)
XLOC_004063 CR854846.1 misc upstream 327459 16127382 ~ 16127678 (-)
XLOC_004045 CR550302.1 non-coding downstream 778731 15018138 ~ 15019527 (-)
XLOC_004059 CR848761.1 non-coding upstream 258268 16058191 ~ 16058307 (-)
XLOC_004062 NA non-coding upstream 320089 16120012 ~ 16120290 (-)

Expression


Co-expression Network