G2174054


Basic Information

Item Value
gene id G2174054
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 30913764 ~ 30913996 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2484770
CCATGACCCATCGTCTGTTTACATCCTCGTCaatccaaatcaaatgtatttgtcacatacacatggtaagcagatgttaatgcgagtgtagcgaaatgcttgtgcttctagttcccgacaatgcagtaataaccaacgggTAATCTAATCTAACCTAACAGTTCCAAAtccactaccttatacacacaagtgtaaagggataaagatcCGTCAACATAGCAGCCCCCCTCCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2484770 True 233 lncRNA 0.43 1 30913764 30913996

Neighbor

gene id symbol gene type direction distance location
LOC110510022 LOC106563433 coding upstream 90911 30817845 ~ 30824144 (+)
il13ra2b il13ra2b coding upstream 108945 30786744 ~ 30804819 (+)
LOC110509412 LOC106563437 coding upstream 132946 30691961 ~ 30780818 (+)
LOC110510020 LOC106563438 coding upstream 244290 30652692 ~ 30669474 (+)
LOC110510009 LOC106563450 coding upstream 622561 30264990 ~ 30291203 (+)
LOC110510024 LOC106563431 coding downstream 7492 30921488 ~ 31017638 (+)
LOC110510025 LOC106563429 coding downstream 130071 31022733 ~ 31057809 (+)
her1 LOC106603184 coding downstream 303962 31217958 ~ 31218977 (+)
mepce LOC106563428 coding downstream 312341 31226337 ~ 31231531 (+)
LOC110509418 LOC106563427 coding downstream 323433 31237429 ~ 31443740 (+)
G2174050 NA non-coding upstream 32957 30880110 ~ 30880807 (+)
G2174049 NA non-coding upstream 35241 30878258 ~ 30878523 (+)
G2174047 NA non-coding upstream 36917 30876585 ~ 30876847 (+)
G2174044 NA non-coding upstream 39027 30873806 ~ 30874737 (+)
G2174036 NA non-coding upstream 66058 30845854 ~ 30847706 (+)
G2174583 NA non-coding downstream 2447 30916443 ~ 30936812 (+)
G2174589 NA non-coding downstream 45308 30959304 ~ 31020432 (+)
G2174608 NA non-coding downstream 54570 30968566 ~ 30968974 (+)
G2174633 NA non-coding downstream 108105 31022101 ~ 31022335 (+)
G2173841 LOC106563447 other upstream 445640 30463942 ~ 30468124 (+)
G2173761 LOC106563448 other upstream 573073 30336852 ~ 30355090 (+)
G2173754 LOC106563449 other upstream 590149 30319648 ~ 30323615 (+)
G2173675 NA other upstream 776444 30136723 ~ 30137320 (+)
G2174785 NA other downstream 403841 31317837 ~ 31318377 (+)
G2175233 psmb6 other downstream 696548 31610544 ~ 31611469 (+)
LOC110509422 LOC106563560 other downstream 986985 31820484 ~ 31908546 (+)
G2175413 NA other downstream 1123051 32037047 ~ 32037736 (+)
LOC110509425 LOC106563572 other downstream 1207774 32115629 ~ 32150579 (+)

Expression


Co-expression Network