XLOC_004156 (tmem51b)


Basic Information

Item Value
gene id XLOC_004156
gene name tmem51b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 25833219 ~ 25853212 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007939
CTGCTTAACTCTTTTCAACTGAGTGCTGCAGTCGAGTTGATTTTGAACAAAGTTCCTGTGTCGGTTAAAAGACCACAAATAGTAGATGAAGAGTGAGTGAGACTGAAGTTAAAGGATTTACTAAGTTTTTCTCCTTCCTCAAGCGAATGAAAGGACATCGCGGACGCTCGCCTCACCTGCGGCCAGGAGTAACACCTGCTTCAGTGCAACTCTCATCCTCCCTTCTGGCCTGAATAAGTGCATGTTGGTGTCTTAAGGAGTGTTTTCAGCCATGTGCTCCAGCGGGCAACCTCTGTGTGCGGGAAACAGACCCAGCAGTCGTGGGGGCTCCAGCTCTGGCTCTCAGTATGCCCTGTGTGCTCTTGGCGTGGGTTTGGTGGCACTCGGAGTGGTCATGATCGTATGGAGCATCGTCCCTTCTGAAGCTGCACAGGTGCACAATGTTACAGCCGCCAATAATGGAAGTACCAACACCGACCAAACCAAAACGTCATCCATCGCATTTGTGCTTGTTGGCTCCGGGGCTGCCATGCTCTTGCTCGCCATATGTTTAGGGGTGAGGAACAGGAAGCGGAGGAGACAGGGGGAATCTGCAGGTGCGAACGGTGCTGATTATGTGGATCATGTGCGTAGAGTTCCGGATGAGGACTCAGCTGATGAAGCAGCACCAACCTACGATGTTCCGACCTACGAGGAGGCAGTGACCAGCGGCCAGTACCCCATTCGTCAGAGCAACTTACGCCAAAGCTACCAGCTACCCTCCTACGAAGATCTGATCACTGCTGTTGAAAATGAAGGCCAGCCACCGAAAGAAGGTAACACCCAAGAAGCCCTTCAGCCTCCTCCAGGCCCCGAACCACAGCCTGCAGCCCCAGCTCGCAGCACCAGCAGAGCCAGCCGAATCCTCAGACCCCTGCGGGTGCGCAGGATCAAGTCCGAGAAGCTCCACGTCAAGGATATTCGCCTGAACATCCAGAACCCTGCGCAGGGTGGAGTGGTGACCATTGAACCACTGACTCCACCACCGCAATATGAGGACAAACCCCCTCAGCTGCCCACCGGAGCAGTATAATAAGTTCTGTGCACAAGCCTAAAGTTTTCCATGGGTTCAAAATATGCCAAATGATGAATTAGAATATGTTTGTGCGTGTGCACTGTCTCTGCGCTTTTTGGACAAAACACTAAAGCCTACTTGAATGTGTTTCAGCAGACCTTTTCTTATTTGAAGAGcagtatgttgttgttgttgttgttgttttttatttgaatctAAATGAGGAAGGATATGAATGCCACTGAGCAGCtcttgtgagagagagagattcataGTTTACTTCCAAAGAACTACAATGTACGTTGCTAAAGCTAATAACAATAGAAA

Function

symbol description
tmem51b Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM51 (transmembrane protein 51).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-5373 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM51 (transmembrane protein 51).

Ensembl:

ensembl_id ENSDARG00000061916

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007939 True 1381 mRNA 0.50 3 25833219 25853212

Neighbor

gene id symbol gene type direction distance location
XLOC_004155 skib coding downstream 3507 25782721 ~ 25829712 (-)
XLOC_004154 plch2b coding downstream 55901 25752198 ~ 25777318 (-)
XLOC_004153 brpf3a coding downstream 98802 25712772 ~ 25734417 (-)
XLOC_004152 CR933820.1 coding downstream 163264 25669839 ~ 25669955 (-)
XLOC_004151 si:dkey-245f22.3 coding downstream 293896 25528557 ~ 25539323 (-)
XLOC_004157 kaznb coding upstream 4729 25857941 ~ 26180714 (-)
XLOC_004158 prdm2b coding upstream 336491 26189703 ~ 26217510 (-)
XLOC_004159 foxj3 coding upstream 375706 26228918 ~ 26362334 (-)
XLOC_004160 utp3 coding upstream 517169 26370381 ~ 26375575 (-)
XLOC_004161 st3gal8 coding upstream 715280 26568492 ~ 26590429 (-)
XLOC_004063 CR854846.1 misc downstream 9705541 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 13141528 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 13211452 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 13241923 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 13319957 12512966 ~ 12513262 (-)
XLOC_004150 NA non-coding downstream 356239 25475305 ~ 25476980 (-)
XLOC_004147 NA non-coding downstream 424323 25368112 ~ 25408896 (-)
XLOC_004144 dre-mir-499 non-coding downstream 627976 25205153 ~ 25205243 (-)
XLOC_004142 CR628365.2 non-coding downstream 865332 24967771 ~ 24967887 (-)
XLOC_004165 CR847934.1 non-coding upstream 895080 26748292 ~ 26748429 (-)
XLOC_004167 NA non-coding upstream 1648993 27502205 ~ 27507973 (-)
XLOC_004169 NA non-coding upstream 1690366 27543578 ~ 27625465 (-)
XLOC_004173 BX601648.1 non-coding upstream 1930546 27783758 ~ 27806767 (-)
XLOC_004174 NA non-coding upstream 1947647 27800859 ~ 27809715 (-)

Expression


Co-expression Network