XLOC_004142 (CR628365.2)



Basic Information


Item Value
gene id XLOC_004142
gene name CR628365.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 24967771 ~ 24967887 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00007913
GGCCACAGCCACATCACCTTGCAGCCCAAGAGCacttactcactgaagctaagcagggctgagcctagttagtacctggatggtagaccacatggggaaactaggctgctgttggaa

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105865

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00007913 True 117 rRNA 0.54 1 24967771 24967887

Neighbor


gene id symbol gene type direction distance location
XLOC_004141 CR628365.1 coding downstream 147770 24819265 ~ 24820001 (-)
XLOC_004140 NA coding downstream 253478 24709784 ~ 24714293 (-)
XLOC_004139 olfml3b coding downstream 286479 24671676 ~ 24681292 (-)
XLOC_004138 plekhg5a coding downstream 428911 24464356 ~ 24538860 (-)
XLOC_004137 mxra8a coding downstream 508985 24429923 ~ 24458786 (-)
XLOC_004143 myh7ba coding upstream 213999 25181886 ~ 25213689 (-)
XLOC_004144 dre-mir-499 coding upstream 237266 25205153 ~ 25205243 (-)
XLOC_004145 snai1a coding upstream 283608 25251495 ~ 25257595 (-)
XLOC_004146 si:ch211-232b12.5 coding upstream 345923 25313810 ~ 25324534 (-)
XLOC_004147 NA coding upstream 400225 25368112 ~ 25408896 (-)
XLOC_004063 CR854846.1 misc downstream 8840093 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 12276080 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 12346004 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 12376475 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 12454509 12512966 ~ 12513262 (-)
XLOC_004131 CR354444.1 non-coding downstream 1066410 23900000 ~ 23901361 (-)
XLOC_004130 LO016980.1 non-coding downstream 1312293 23655350 ~ 23655478 (-)
XLOC_004125 BX571675.2 non-coding downstream 1658453 23305755 ~ 23309318 (-)
XLOC_004150 NA non-coding upstream 507418 25475305 ~ 25476980 (-)
XLOC_004152 CR933820.1 non-coding upstream 701952 25669839 ~ 25669955 (-)
XLOC_004165 CR847934.1 non-coding upstream 1780405 26748292 ~ 26748429 (-)

Expression



Co-expression Network