RNA id: TCONS_00007913


Basic Information

Item Value
RNA id TCONS_00007913
length 117
RNA type rRNA
GC content 0.54
exon number 1
gene id XLOC_004142
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 24967771 ~ 24967887 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GGCCACAGCCACATCACCTTGCAGCCCAAGAGCacttactcactgaagctaagcagggctgagcctagttagtacctggatggtagaccacatggggaaactaggctgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000176782

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00007912 lncRNA downstream 147770 24819265 ~ 24820001 (-) True XLOC_004141
TCONS_00008472 lncRNA downstream 253478 24712969 ~ 24714293 (-) True XLOC_004140
TCONS_00008795 lncRNA downstream 253496 24711119 ~ 24714275 (-) False XLOC_004140
TCONS_00008471 lncRNA downstream 254849 24711804 ~ 24712922 (-) False XLOC_004140
TCONS_00008470 lncRNA downstream 255220 24709784 ~ 24712551 (-) False XLOC_004140
TCONS_00007917 lncRNA upstream 241847 25209734 ~ 25213264 (-) True XLOC_004143
TCONS_00008796 lncRNA upstream 400225 25368112 ~ 25403683 (-) False XLOC_004147
TCONS_00007921 lncRNA upstream 400225 25368112 ~ 25408896 (-) False XLOC_004147
TCONS_00007924 lncRNA upstream 444456 25412343 ~ 25413153 (-) True XLOC_004148
TCONS_00008797 lncRNA upstream 507418 25475305 ~ 25476582 (-) False XLOC_004150
TCONS_00007911 mRNA downstream 286479 24671676 ~ 24681292 (-) True XLOC_004139
TCONS_00007907 mRNA downstream 428911 24464356 ~ 24538860 (-) False XLOC_004138
TCONS_00007908 mRNA downstream 428919 24465292 ~ 24538852 (-) False XLOC_004138
TCONS_00007906 mRNA downstream 434783 24464356 ~ 24532988 (-) False XLOC_004138
TCONS_00007905 mRNA downstream 441268 24464356 ~ 24526503 (-) False XLOC_004138
TCONS_00007914 mRNA upstream 213999 25181886 ~ 25213689 (-) False XLOC_004143
TCONS_00007915 mRNA upstream 214926 25182813 ~ 25213651 (-) False XLOC_004143
TCONS_00007918 mRNA upstream 283608 25251495 ~ 25257045 (-) False XLOC_004145
TCONS_00007919 mRNA upstream 284579 25252466 ~ 25257595 (-) True XLOC_004145
TCONS_00007920 mRNA upstream 345923 25313810 ~ 25324534 (-) True XLOC_004146
TCONS_00007910 other downstream 434813 24525676 ~ 24532958 (-) True XLOC_004138
TCONS_00007888 other downstream 1312293 23655350 ~ 23655478 (-) True XLOC_004130
TCONS_00007873 other downstream 1808464 23159189 ~ 23159307 (-) True XLOC_004123
TCONS_00007863 other downstream 2368216 22597114 ~ 22599555 (-) True XLOC_004120
TCONS_00007852 other downstream 3215182 21752475 ~ 21752589 (-) True XLOC_004115
TCONS_00007916 other upstream 237266 25205153 ~ 25205243 (-) True XLOC_004144
TCONS_00007927 other upstream 508212 25476099 ~ 25476185 (-) True XLOC_004150
TCONS_00007928 other upstream 560670 25528557 ~ 25532480 (-) False XLOC_004151
TCONS_00007931 other upstream 701952 25669839 ~ 25669955 (-) True XLOC_004152
TCONS_00007940 other upstream 890054 25857941 ~ 25931082 (-) False XLOC_004157