XLOC_004144 (dre-mir-499)



Basic Information


Item Value
gene id XLOC_004144
gene name dre-mir-499
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 25205153 ~ 25205243 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00007916
ACTGAGAGGGAGGCAGTTAAGACTTGCAGTGATGTTTAGAGAAATGTCACATGAACATCACTTTAAGTCTGTGCTGGCTCCTGTTCTGAGT

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000080181

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00007916 True 91 miRNA 0.44 1 25205153 25205243

Neighbor


gene id symbol gene type direction distance location
XLOC_004142 CR628365.2 coding downstream 237266 24967771 ~ 24967887 (-)
XLOC_004141 CR628365.1 coding downstream 385152 24819265 ~ 24820001 (-)
XLOC_004140 NA coding downstream 490860 24709784 ~ 24714293 (-)
XLOC_004139 olfml3b coding downstream 523861 24671676 ~ 24681292 (-)
XLOC_004138 plekhg5a coding downstream 666293 24464356 ~ 24538860 (-)
XLOC_004145 snai1a coding upstream 46252 25251495 ~ 25257595 (-)
XLOC_004146 si:ch211-232b12.5 coding upstream 108567 25313810 ~ 25324534 (-)
XLOC_004147 NA coding upstream 162869 25368112 ~ 25408896 (-)
XLOC_004148 gata1a coding upstream 206671 25411914 ~ 25418856 (-)
XLOC_004149 hcfc1a coding upstream 231197 25436440 ~ 25461336 (-)
XLOC_004063 CR854846.1 misc downstream 9077475 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 12513462 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 12583386 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 12613857 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 12691891 12512966 ~ 12513262 (-)
XLOC_004131 CR354444.1 non-coding downstream 1303792 23900000 ~ 23901361 (-)
XLOC_004130 LO016980.1 non-coding downstream 1549675 23655350 ~ 23655478 (-)
XLOC_004150 NA non-coding upstream 270062 25475305 ~ 25476980 (-)
XLOC_004152 CR933820.1 non-coding upstream 464596 25669839 ~ 25669955 (-)
XLOC_004165 CR847934.1 non-coding upstream 1543049 26748292 ~ 26748429 (-)
XLOC_004167 NA non-coding upstream 2296962 27502205 ~ 27507973 (-)

Expression



Co-expression Network